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Diffstat (limited to 'sci-chemistry/aria/aria-2.3.2-r1.ebuild')
-rw-r--r--sci-chemistry/aria/aria-2.3.2-r1.ebuild92
1 files changed, 0 insertions, 92 deletions
diff --git a/sci-chemistry/aria/aria-2.3.2-r1.ebuild b/sci-chemistry/aria/aria-2.3.2-r1.ebuild
deleted file mode 100644
index fc25192f54b6..000000000000
--- a/sci-chemistry/aria/aria-2.3.2-r1.ebuild
+++ /dev/null
@@ -1,92 +0,0 @@
-# Copyright 1999-2011 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r1.ebuild,v 1.1 2011/10/07 19:23:04 jlec Exp $
-
-EAPI=3
-
-PYTHON_DEPEND="2"
-PYTHON_USE_WITH="tk"
-
-inherit base eutils python versionator
-
-MY_P="${PN}$(get_version_component_range 1-2 ${PV})"
-
-DESCRIPTION="Automated NOE assignment and NMR structure calculation"
-HOMEPAGE="http://aria.pasteur.fr/"
-SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2.tar.gz"
-
-SLOT="0"
-LICENSE="cns"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="examples"
-
-RDEPEND="
- sci-chemistry/clashlist
- sci-chemistry/procheck
- sci-libs/clashscore-db
- dev-python/numpy
- dev-python/matplotlib[tk]
- >=sci-chemistry/cns-1.2.1-r7[aria,openmp]
- >=dev-lang/tk-8.3
- >=sci-chemistry/ccpn-2.0.5
- >=dev-tcltk/tix-8.1.4"
-DEPEND="${RDEPEND}"
-
-RESTRICT="fetch"
-
-S="${WORKDIR}/${MY_P}"
-
-pkg_nofetch(){
- einfo "Go to ${HOMEPAGE}, download ${A}"
- einfo "and place it in ${DISTDIR}"
-}
-
-src_prepare() {
- epatch "${FILESDIR}"/${P}-through-space.patch
-}
-
-src_test(){
- export CCPNMR_TOP_DIR="${EPREFIX}"/$(python_get_sitedir)
- export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python
- $(PYTHON) check.py || die
-}
-
-src_install(){
- insinto "$(python_get_sitedir)/${PN}"
- doins -r src aria2.py || die "failed to install ${PN}"
- insinto "$(python_get_sitedir)/${PN}"/cns
- doins -r cns/{protocols,toppar,src/helplib} || die "failed to install cns part"
-
- if use examples; then
- insinto /usr/share/${P}/
- doins -r examples || die
- fi
-
- # ENV
- cat >> "${T}"/20aria <<- EOF
- ARIA2="${EPREFIX}/$(python_get_sitedir)/${PN}"
- EOF
-
- doenvd "${T}"/20aria
-
- # Launch Wrapper
- cat >> "${T}"/aria <<- EOF
- #!/bin/sh
- export CCPNMR_TOP_DIR="${EPREFIX}/$(python_get_sitedir)"
- export PYTHONPATH="${EPREFIX}/$(python_get_sitedir)/ccpn/python"
- exec "$(PYTHON)" -O "\${ARIA2}"/aria2.py \$@
- EOF
-
- dobin "${T}"/aria || die "failed to install wrapper"
- dosym aria /usr/bin/aria2
-
- dodoc README || die
-}
-
-pkg_postinst() {
- python_mod_optimize ${PN}
-}
-
-pkg_postrm() {
- python_mod_cleanup ${PN}
-}