diff options
Diffstat (limited to 'sci-chemistry/aria/aria-2.3.2-r1.ebuild')
-rw-r--r-- | sci-chemistry/aria/aria-2.3.2-r1.ebuild | 92 |
1 files changed, 0 insertions, 92 deletions
diff --git a/sci-chemistry/aria/aria-2.3.2-r1.ebuild b/sci-chemistry/aria/aria-2.3.2-r1.ebuild deleted file mode 100644 index fc25192f54b6..000000000000 --- a/sci-chemistry/aria/aria-2.3.2-r1.ebuild +++ /dev/null @@ -1,92 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/aria/aria-2.3.2-r1.ebuild,v 1.1 2011/10/07 19:23:04 jlec Exp $ - -EAPI=3 - -PYTHON_DEPEND="2" -PYTHON_USE_WITH="tk" - -inherit base eutils python versionator - -MY_P="${PN}$(get_version_component_range 1-2 ${PV})" - -DESCRIPTION="Automated NOE assignment and NMR structure calculation" -HOMEPAGE="http://aria.pasteur.fr/" -SRC_URI="http://aria.pasteur.fr/archives/${MY_P}.2.tar.gz" - -SLOT="0" -LICENSE="cns" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" - -RDEPEND=" - sci-chemistry/clashlist - sci-chemistry/procheck - sci-libs/clashscore-db - dev-python/numpy - dev-python/matplotlib[tk] - >=sci-chemistry/cns-1.2.1-r7[aria,openmp] - >=dev-lang/tk-8.3 - >=sci-chemistry/ccpn-2.0.5 - >=dev-tcltk/tix-8.1.4" -DEPEND="${RDEPEND}" - -RESTRICT="fetch" - -S="${WORKDIR}/${MY_P}" - -pkg_nofetch(){ - einfo "Go to ${HOMEPAGE}, download ${A}" - einfo "and place it in ${DISTDIR}" -} - -src_prepare() { - epatch "${FILESDIR}"/${P}-through-space.patch -} - -src_test(){ - export CCPNMR_TOP_DIR="${EPREFIX}"/$(python_get_sitedir) - export PYTHONPATH=.:${CCPNMR_TOP_DIR}/ccpn/python - $(PYTHON) check.py || die -} - -src_install(){ - insinto "$(python_get_sitedir)/${PN}" - doins -r src aria2.py || die "failed to install ${PN}" - insinto "$(python_get_sitedir)/${PN}"/cns - doins -r cns/{protocols,toppar,src/helplib} || die "failed to install cns part" - - if use examples; then - insinto /usr/share/${P}/ - doins -r examples || die - fi - - # ENV - cat >> "${T}"/20aria <<- EOF - ARIA2="${EPREFIX}/$(python_get_sitedir)/${PN}" - EOF - - doenvd "${T}"/20aria - - # Launch Wrapper - cat >> "${T}"/aria <<- EOF - #!/bin/sh - export CCPNMR_TOP_DIR="${EPREFIX}/$(python_get_sitedir)" - export PYTHONPATH="${EPREFIX}/$(python_get_sitedir)/ccpn/python" - exec "$(PYTHON)" -O "\${ARIA2}"/aria2.py \$@ - EOF - - dobin "${T}"/aria || die "failed to install wrapper" - dosym aria /usr/bin/aria2 - - dodoc README || die -} - -pkg_postinst() { - python_mod_optimize ${PN} -} - -pkg_postrm() { - python_mod_cleanup ${PN} -} |