1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
|
{'description': {'en': 'The Gentoo Science Overlay is intended as a place to '
'work\n'
' outside of the main portage tree on experimental '
'ebuilds. Our aim is to\n'
' increase the rate of development of scientific '
'packages for Gentoo, but\n'
' ebuilds in this repository are by their very '
'nature more experimental. If\n'
' you wish to use them you should be willing to help '
'test and report\n'
' bugs. For contribution read '
'https://wiki.gentoo.org/wiki/Project:Science/Contributing\n'
' '},
'feed': ['https://cgit.gentoo.org/proj/sci.git/atom/',
'https://github.com/gentoo-science/sci/commits/master.atom'],
'homepage': 'https://wiki.gentoo.org/wiki/Project:Science',
'name': 'science',
'owner': [{'email': 'sci@gentoo.org', 'name': 'sci', 'type': 'project'}],
'quality': 'experimental',
'source': [{'type': 'git',
'uri': 'https://anongit.gentoo.org/git/proj/sci.git'},
{'type': 'git', 'uri': 'git://anongit.gentoo.org/proj/sci.git'},
{'type': 'git', 'uri': 'git+ssh://git@git.gentoo.org/proj/sci.git'},
{'type': 'git', 'uri': 'https://github.com/gentoo-science/sci.git'},
{'type': 'git', 'uri': 'git://github.com/gentoo-science/sci.git'},
{'type': 'git', 'uri': 'git@github.com:gentoo-science/sci.git'}],
'status': 'official'}
$ pmaint sync science
warning: Pulling without specifying how to reconcile divergent branches is
discouraged. You can squelch this message by running one of the following
commands sometime before your next pull:
git config pull.rebase false # merge (the default strategy)
git config pull.rebase true # rebase
git config pull.ff only # fast-forward only
You can replace "git config" with "git config --global" to set a default
preference for all repositories. You can also pass --rebase, --no-rebase,
or --ff-only on the command line to override the configured default per
invocation.
From https://anongit.gentoo.org/git/proj/sci
9290e3ac6..ee247b86d master -> origin/master
Updating 9290e3ac6..ee247b86d
Fast-forward
profiles/package.mask | 8 --
sci-biology/VelvetOptimiser/Manifest | 2 +-
...r-2.2.5.ebuild => VelvetOptimiser-2.2.6.ebuild} | 14 +-
sci-biology/vague-bin/vague-bin-1.0.5.ebuild | 17 ++-
sci-biology/wcd/Manifest | 2 +-
sci-biology/wcd/wcd-0.6.3.ebuild | 62 ---------
sci-biology/wcd/wcd-0.6.3_p20180430.ebuild | 48 +++++++
sci-biology/wgs_tools/Manifest | 4 +-
sci-biology/wgs_tools/wgs_tools-9999.ebuild | 11 +-
sci-chemistry/camshift/Manifest | 1 -
sci-chemistry/camshift/camshift-1.35.0.ebuild | 51 -------
sci-chemistry/camshift/files/1.35.0-gcc47.patch | 148 ---------------------
sci-chemistry/camshift/files/1.35.0-gentoo.patch | 85 ------------
sci-chemistry/camshift/metadata.xml | 8 --
sci-chemistry/dssp2pdb/Manifest | 1 -
sci-chemistry/dssp2pdb/dssp2pdb-0.03.ebuild | 24 ----
sci-chemistry/dssp2pdb/metadata.xml | 8 --
sci-chemistry/mddnmr/Manifest | 2 +-
.../{mddnmr-2.4-r1.ebuild => mddnmr-2.7.ebuild} | 11 +-
19 files changed, 79 insertions(+), 428 deletions(-)
rename sci-biology/VelvetOptimiser/{VelvetOptimiser-2.2.5.ebuild => VelvetOptimiser-2.2.6.ebuild} (64%)
delete mode 100644 sci-biology/wcd/wcd-0.6.3.ebuild
create mode 100644 sci-biology/wcd/wcd-0.6.3_p20180430.ebuild
delete mode 100644 sci-chemistry/camshift/Manifest
delete mode 100644 sci-chemistry/camshift/camshift-1.35.0.ebuild
delete mode 100644 sci-chemistry/camshift/files/1.35.0-gcc47.patch
delete mode 100644 sci-chemistry/camshift/files/1.35.0-gentoo.patch
delete mode 100644 sci-chemistry/camshift/metadata.xml
delete mode 100644 sci-chemistry/dssp2pdb/Manifest
delete mode 100644 sci-chemistry/dssp2pdb/dssp2pdb-0.03.ebuild
delete mode 100644 sci-chemistry/dssp2pdb/metadata.xml
rename sci-chemistry/mddnmr/{mddnmr-2.4-r1.ebuild => mddnmr-2.7.ebuild} (87%)
*** syncing science
*** synced science
* Sync succeeded
$ git log --format=%ci -1
$ git show -q --pretty=format:%G? HEAD
$ pmaint regen --use-local-desc --pkg-desc-index -t 1 science
* Cache regenerated successfully
|
GitWeb