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# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python3_{6,7,8,9} )
DISTUTILS_USE_SETUPTOOLS=rdepend
inherit distutils-r1
DESCRIPTION="Read, write and analyze MD trajectories with only a few lines of Python code"
HOMEPAGE="http://mdtraj.org"
SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz"
SLOT="0"
LICENSE="GPL-2"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE=""
RDEPEND="
dev-python/astor[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pandas[${PYTHON_USEDEP}]
dev-python/pytables[${PYTHON_USEDEP}]
dev-python/networkx[${PYTHON_USEDEP}]
dev-python/scipy[${PYTHON_USEDEP}]
"
DEPEND="${RDEPEND}
test? (
dev-python/jupyter_client[${PYTHON_USEDEP}]
dev-python/nbformat[${PYTHON_USEDEP}]
)
"
distutils_enable_tests pytest
# Tests fail (in previous ebuild versions they weren't even run
RESTRICT="test"
python_prepare() {
sed -e "s:re.match('build.*(mdtraj.*)', output_dir).group(1):'.':g" \
-i basesetup.py || die
distutils-r1_python_prepare_all
}
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