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# Copyright 1999-2011 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Id$
DESCRIPTION="A database of eucaryotic transcription factors"
HOMEPAGE="http://www.gene-regulation.com/pub/databases.html"
SRC_URI="ftp://ftp.ebi.ac.uk/pub/databases/${PN}/${PN}32.tar.Z"
LICENSE="public-domain"
SLOT="3"
KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris"
IUSE="emboss minimal"
# Minimal build keeps only the indexed files (if applicable) and the documentation.
# The non-indexed database is not installed.
DEPEND="emboss? ( sci-biology/emboss )"
RDEPEND="${DEPEND}"
S="${WORKDIR}"
src_compile() {
if use emboss; then
echo
einfo "Indexing TRANSFAC for usage with EMBOSS."
EMBOSS_DATA=. tfextract -auto -infile class.dat || die \
"Indexing TRANSFAC failed."
echo
fi
}
src_install() {
if ! use minimal; then
insinto /usr/share/${PN}-${SLOT}
doins *.dat || die
fi
if use emboss; then
insinto /usr/share/EMBOSS/data
doins tf* || die
fi
}
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