summaryrefslogtreecommitdiff
blob: 5b8f82b2f7209261cbb0ec2d7fd1c356024a3a74 (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
# Copyright 2021-2023 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=8

DISTUTILS_USE_PEP517=setuptools
PYTHON_COMPAT=( python3_{10..11} )

inherit distutils-r1

DESCRIPTION="Read and write TIFF files"
HOMEPAGE="
	https://pypi.org/project/tifffile/
	https://github.com/cgohlke/tifffile/
	https://www.cgohlke.com/
"
SRC_URI="
	https://github.com/cgohlke/tifffile/archive/v${PV}.tar.gz
		-> ${P}.gh.tar.gz
"

LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~arm64 ~x86"

RDEPEND="
	>=dev-python/numpy-1.19.2[${PYTHON_USEDEP}]
"
BDEPEND="
	test? (
		dev-python/dask[${PYTHON_USEDEP}]
		dev-python/defusedxml[${PYTHON_USEDEP}]
		>=dev-python/fsspec-2021.5.0[${PYTHON_USEDEP}]
		dev-python/lxml[${PYTHON_USEDEP}]
		dev-python/xarray[${PYTHON_USEDEP}]
	)
"

distutils_enable_tests pytest

EPYTEST_DESELECT=(
	# Internet
	tests/test_tifffile.py::test_class_omexml
	tests/test_tifffile.py::test_class_omexml_fail
	tests/test_tifffile.py::test_class_omexml_modulo
	tests/test_tifffile.py::test_class_omexml_attributes
	tests/test_tifffile.py::test_class_omexml_multiimage
	tests/test_tifffile.py::test_write_ome
	tests/test_tifffile.py::test_write_ome_manual
	# requires tons of free space
	tests/test_tifffile.py::test_write_3gb
	tests/test_tifffile.py::test_write_5GB_bigtiff
	tests/test_tifffile.py::test_write_5GB_fails
	tests/test_tifffile.py::test_write_6gb
	tests/test_tifffile.py::test_write_bigtiff
	'tests/test_tifffile.py::test_write_imagej_raw'
	# TODO
	tests/test_tifffile.py::test_issue_imagej_hyperstack_arg
	tests/test_tifffile.py::test_issue_description_overwrite
	# missing private marker
	# https://github.com/cgohlke/tifffile/pull/195
	tests/test_tifffile.py::test_issue_invalid_predictor
)