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* sci-biology/newick-utils: update EAPI 7 -> 8Eli Schwartz2024-04-111-1/+1
* sci-biology/newick-utils: update HOMEPAGE, SRC_URI to archive.orgEli Schwartz2024-04-111-2/+2
* sci-biology/newick-utils: mark as LTO-unsafeEli Schwartz2024-04-111-2/+7
* sci-biology/kallisto: update EAPI 7 -> 8Eli Schwartz2024-04-071-1/+1
* sci-biology/kallisto: port to catch2 version 3Eli Schwartz2024-04-073-9/+13
* sci-biology/emboss: avoid file collision with dev-texlive/texlive-latexextraDavid Seifert2024-03-301-0/+3
* sci-biology/biopandas: Remove last-rited pkgMichał Górny2024-03-293-45/+0
* sci-biology/bcftools: add 1.19David Seifert2024-03-262-0/+43
* sci-biology/samtools: add 1.19.2David Seifert2024-03-262-0/+48
* sci-biology/mothur: uncomment patch...Sam James2024-03-221-1/+1
* sci-biology/mothur: add 1.48.0Sam James2024-03-224-0/+139
* sci-biology/qrna: add 2.0.4Eli Schwartz2024-03-213-0/+443
* sci-biology/t-coffee: mark as LTO-unsafe, strict-aliasing unsafeEli Schwartz2024-03-201-1/+9
* sci-biology/muscle: fix variable orderSam James2024-03-201-2/+1
* sci-biology/muscle: drop unused flag-o-matic from 5.1.0Sam James2024-03-201-1/+1
* sci-biology/muscle: add 5.1.0Eli Schwartz2024-03-203-0/+83
* sci-biology/muscle: mark as LTO-unsafe, strict-aliasing unsafeEli Schwartz2024-03-201-2/+10
* sci-biology/glimmerhmm: update EAPI 7 -> 8Sam James2024-03-121-3/+2
* sci-biology/glimmerhmm: fix SRC_URISam James2024-03-121-1/+1
* sci-biology/glimmerhmm: add 3.0.4Eli Schwartz2024-03-123-0/+202
* sci-biology/glimmerhmm: patch sources to fix LTOEli Schwartz2024-03-122-1/+29
* sci-biology/abyss: mark as LTO-unsafeEli Schwartz2024-03-081-1/+6
* sci-biology/abyss: remove useless sedEli Schwartz2024-03-081-2/+1
* sci-biology/bwa: mark as LTO-unsafeEli Schwartz2024-02-291-2/+7
* sci-biology/exonerate: mark LTO-unsafeEli Schwartz2024-02-291-2/+7
* Move {sys-devel → dev-build}/consMichał Górny2024-01-171-2/+3
* Move {sys-devel → dev-build}/autoconf-archiveMichał Górny2024-01-151-2/+2
* sci-biology/biopython: sys-devel/flex -> app-alternatives/lexSam James2024-01-081-2/+2
* sci-biology/pilercr: Stabilize 1.0-r3 amd64, #920144Arthur Zamarin2023-12-161-1/+1
* sci-biology/tree-puzzle: fix configure checks for modern cSam James2023-12-022-0/+21
* sci-biology/treeviewx: add 0.5.1.20100823_p4Pacho Ramos2023-11-242-0/+53
* sci-biology/stride: stabilize 20060723 for amd64Pacho Ramos2023-10-191-1/+1
* sci-biology/stride: add 20060723Pacho Ramos2023-10-192-0/+37
* sci-biology/express: treecleanFlorian Schmaus2023-10-025-121/+0
* sci-biology/pilercr: update HOMEPAGE, SRC_URIAndrew Ammerlaan2023-09-111-2/+2
* sci-biology/pilercr: Fix error: ISO C++17 does not allow register storage cla...Brahmajit Das2023-09-112-0/+43
* sci-biology/elph: Fix C++17 does not allow register storage classBrahmajit Das2023-09-072-2/+107
* sci-biology/biopython: drop 1.81David Seifert2023-07-301-61/+0
* sci-biology/biopython: use PEP517 buildPacho Ramos2023-07-213-0/+99
* sci-biology/uchime: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/trf: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/treeviewx: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/tree-puzzle: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/stride: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/sibsim4: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/probcons: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/pilercr: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/piler: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/phyml: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2
* sci-biology/pals: destabilize for ~x86Arthur Zamarin2023-06-091-2/+2