2016-06-04 21:36:11 UTC

5 files changed, 22 insertions, 6 deletions

diff --git a/metadata/md5-cache/dev-lang/perl-5.24.0-r1 b/metadata/md5-cache/dev-lang/perl-5.24.0-r1
index 362e77f9680e..4e18f99b6a91 100644
--- a/metadata/md5-cache/dev-lang/perl-5.24.0-r1
+++ b/metadata/md5-cache/dev-lang/perl-5.24.0-r1
@@ -4,11 +4,12 @@ DESCRIPTION=Larry Wall's Practical Extraction and Report Language
 EAPI=6
 HOMEPAGE=http://www.perl.org/
 IUSE=berkdb debug doc gdbm ithreads
+KEYWORDS=~alpha ~amd64 ~amd64-fbsd ~amd64-linux ~arm ~arm64 ~hppa ~hppa-hpux ~ia64 ~ia64-hpux ~ia64-linux ~m68k ~m68k-mint ~mips ~ppc ~ppc64 ~ppc-aix ~ppc-macos ~s390 ~sh ~sparc ~sparc64-solaris ~sparc-solaris ~x64-freebsd ~x64-macos ~x64-solaris ~x86 ~x86-fbsd ~x86-freebsd ~x86-interix ~x86-linux ~x86-macos ~x86-solaris
 LICENSE=|| ( Artistic GPL-1+ )
 PDEPEND=>=app-admin/perl-cleaner-2.5 >=virtual/perl-File-Temp-0.230.400-r2 >=virtual/perl-Data-Dumper-2.154.0 virtual/perl-Test-Harness
 RDEPEND=berkdb? ( sys-libs/db:* ) gdbm? ( >=sys-libs/gdbm-1.8.3 ) app-arch/bzip2 sys-libs/zlib
 SLOT=0/5.24
-SRC_URI=mirror://cpan/src/5.0/perl-5.24.0.tar.bz2 mirror://cpan/authors/id/R/RJ/RJBS/perl-5.24.0.tar.bz2 mirror://gentoo/perl-5.24.0-patches-1.tar.xz https://dev.gentoo.org/~dilfridge/distfiles/perl-5.24.0-patches-1.tar.xz
+SRC_URI=mirror://cpan/src/5.0/perl-5.24.0.tar.bz2 mirror://cpan/authors/id/R/RJ/RJBS/perl-5.24.0.tar.bz2 mirror://gentoo/perl-5.24.0-patches-2.tar.xz https://dev.gentoo.org/~dilfridge/distfiles/perl-5.24.0-patches-2.tar.xz
 _eclass_exported_funcs=pkg_postrm:- pkg_postinst:- pkg_setup:- src_prepare:- src_configure:- src_test:- src_install:-
 _eclasses_=alternatives	b19e1ec28e600fa497461bddfb9c1f16	eutils	792f83d5ec9536cb5ccef375469d8bde	flag-o-matic	d270fa247153df66074f795fa42dba3e	multilib	d062ae4ba2fc40a19c11de2ad89b6616	multiprocessing	e32940a7b2a9992ad217eccddb84d548	toolchain-funcs	d513d423d449877e49d99af3f7af7acb
-_md5_=b820677f299f07844ac61b6d546a757b
+_md5_=7b9dcc791aad6a35008fefd287c085bb
diff --git a/metadata/md5-cache/dev-util/catalyst-2.0.18-r4 b/metadata/md5-cache/dev-util/catalyst-2.0.18-r4
new file mode 100644
index 000000000000..d8059fc27fdd
--- /dev/null
+++ b/metadata/md5-cache/dev-util/catalyst-2.0.18-r4
@@ -0,0 +1,15 @@
+DEFINED_PHASES=install postinst prepare setup
+DEPEND=app-text/asciidoc >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),python_single_target_python2_7(+)]
+DESCRIPTION=Release metatool used for creating releases based on Gentoo Linux
+EAPI=5
+HOMEPAGE=https://www.gentoo.org/proj/en/releng/catalyst/
+IUSE=ccache kernel_linux python_targets_python2_7
+KEYWORDS=~alpha ~amd64 ~arm ~arm64 ~hppa ~ia64 ~mips ~ppc ~ppc64 ~s390 ~sh ~sparc ~x86 ~x86-fbsd
+LICENSE=GPL-2
+RDEPEND=app-arch/lbzip2 app-crypt/shash app-arch/tar[xattr] virtual/cdrtools amd64? ( >=sys-boot/syslinux-3.72 ) ia64? ( sys-fs/dosfstools ) x86? ( >=sys-boot/syslinux-3.72 ) ccache? ( dev-util/ccache ) kernel_linux? ( app-misc/zisofs-tools >=sys-fs/squashfs-tools-2.1 ) >=dev-lang/python-2.7.5-r2:2.7 >=dev-lang/python-exec-2:=[python_targets_python2_7(-)?,-python_single_target_jython2_7(-),-python_single_target_pypy(-),-python_single_target_pypy3(-),-python_single_target_python3_3(-),-python_single_target_python3_4(-),-python_single_target_python3_5(-),python_single_target_python2_7(+)]
+REQUIRED_USE=python_targets_python2_7
+SLOT=0
+SRC_URI=mirror://gentoo/catalyst-2.0.18.tar.bz2 https://dev.gentoo.org/~jmbsvicetto/distfiles/catalyst-2.0.18.tar.bz2 https://dev.gentoo.org/~mattst88/distfiles/catalyst-2.0.18.tar.bz2 https://dev.gentoo.org/~zerochaos/distfiles/catalyst-2.0.18.tar.bz2 https://dev.gentoo.org/~dolsen/releases/catalyst/catalyst-2.0.18.tar.bz2
+_eclass_exported_funcs=pkg_postinst:- pkg_setup:- src_prepare:- src_install:-
+_eclasses_=eutils	792f83d5ec9536cb5ccef375469d8bde	multilib	d062ae4ba2fc40a19c11de2ad89b6616	python-single-r1	2ebea8fbab356d63110245129a67a6dd	python-utils-r1	13d5b02ea59b21da41c77c9294f3b7f7	toolchain-funcs	d513d423d449877e49d99af3f7af7acb
+_md5_=ace74d1c8c4f37bb0064b5eb363d2e9c
diff --git a/metadata/md5-cache/sci-biology/bowtie-2.2.8 b/metadata/md5-cache/sci-biology/bowtie-2.2.9
index a9fab7c3ca13..7c35639510c2 100644
--- a/metadata/md5-cache/sci-biology/bowtie-2.2.8
+++ b/metadata/md5-cache/sci-biology/bowtie-2.2.9
@@ -8,7 +8,7 @@ KEYWORDS=~amd64 ~x86
 LICENSE=GPL-3
 RDEPEND=dev-lang/perl tbb? ( dev-cpp/tbb )
 SLOT=2
-SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.8/bowtie2-2.2.8-source.zip
+SRC_URI=mirror://sourceforge/project/bowtie-bio/bowtie2/2.2.9/bowtie2-2.2.9-source.zip
 _eclass_exported_funcs=pkg_pretend:- src_compile:- src_install:-
 _eclasses_=eutils	792f83d5ec9536cb5ccef375469d8bde	multilib	d062ae4ba2fc40a19c11de2ad89b6616	toolchain-funcs	d513d423d449877e49d99af3f7af7acb
 _md5_=7dd8090b15e166773555054785056f3f
diff --git a/metadata/pkg_desc_index b/metadata/pkg_desc_index
index 9633452f6008..59d16aca86eb 100644
--- a/metadata/pkg_desc_index
+++ b/metadata/pkg_desc_index
@@ -9591,7 +9591,7 @@ dev-util/buildbot-slave 0.8.10 0.8.12 9999: BuildBot Slave Daemon
 dev-util/bumpversion 0.5.3: Version-bump your software with a single command
 dev-util/bustle 0.4.2-r1 0.4.7-r1 0.5.4: Draw sequence diagrams of D-Bus traffic
 dev-util/byacc 20140101 20141128 20150711: the best variant of the Yacc parser generator
-dev-util/catalyst 2.0.18-r1 2.0.18-r3 2.0.9999 2.9999 3.0_rc1 9999: Release metatool used for creating releases based on Gentoo Linux
+dev-util/catalyst 2.0.18-r1 2.0.18-r3 2.0.18-r4 2.0.9999 2.9999 3.0_rc1 9999: Release metatool used for creating releases based on Gentoo Linux
 dev-util/catfish 1.2.2: A frontend for find, (s)locate, doodle, tracker, beagle, strigi and pinot
 dev-util/catkin 0.6.16-r2 0.7.0 0.7.1 9999: Cmake macros and associated python code used to build some parts of ROS
 dev-util/ccache 3.2.4 3.2.5: fast compiler cache
@@ -15372,7 +15372,7 @@ sci-biology/bioruby 1.4.3.0001-r1 9999: An integrated environment for bioinforma
 sci-biology/biosql 1.0.1: A generic bioinformatics relational database model
 sci-biology/blat 34 34-r1: The BLAST-Like Alignment Tool, a fast genomic sequence aligner
 sci-biology/blossoc 1.4.0: A linkage disequilibrium association mapping tool
-sci-biology/bowtie 1.1.2 1.1.2-r1 2.2.6 2.2.8: Popular short read aligner for Next-generation sequencing data
+sci-biology/bowtie 1.1.2 1.1.2-r1 2.2.6 2.2.9: Popular short read aligner for Next-generation sequencing data
 sci-biology/bwa 0.7.12 0.7.13: Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner
 sci-biology/cd-hit 4.5.1 4.5.4 4.6: Clustering Database at High Identity with Tolerance
 sci-biology/clustal-omega 1.2.1: Scalable multiple alignment of protein sequences
diff --git a/metadata/timestamp.chk b/metadata/timestamp.chk
index c804583dad60..9eb35ea3e184 100644
--- a/metadata/timestamp.chk
+++ b/metadata/timestamp.chk
@@ -1 +1 @@
-Sat, 04 Jun 2016 21:02:15 +0000
+Sat, 04 Jun 2016 21:36:12 +0000