2024-03-29 19:06:46 UTC

47 files changed, 47 insertions, 47 deletions

diff --git a/metadata/md5-cache/sci-biology/HTSeq-2.0.2 b/metadata/md5-cache/sci-biology/HTSeq-2.0.2
index 57eb71dbebe4..61763761216a 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-2.0.2
+++ b/metadata/md5-cache/sci-biology/HTSeq-2.0.2
@@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/htseq/htseq/archive/release_2.0.2.tar.gz -> HTSeq-2.0.2.gh.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b
 _md5_=29d76005d4f5d0a05fc0182fba12f7f5
diff --git a/metadata/md5-cache/sci-biology/HTSeq-9999 b/metadata/md5-cache/sci-biology/HTSeq-9999
index f587c642c4ff..884d458dd799 100644
--- a/metadata/md5-cache/sci-biology/HTSeq-9999
+++ b/metadata/md5-cache/sci-biology/HTSeq-9999
@@ -12,5 +12,5 @@ RDEPEND=dev-python/numpy[python_targets_python3_10(-)?,python_targets_python3_11
 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
 RESTRICT=!test? ( test )
 SLOT=0
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
 _md5_=29d76005d4f5d0a05fc0182fba12f7f5
diff --git a/metadata/md5-cache/sci-biology/abyss-2.3.4 b/metadata/md5-cache/sci-biology/abyss-2.3.4
index 2aa1036f0f9d..7c7bda610626 100644
--- a/metadata/md5-cache/sci-biology/abyss-2.3.4
+++ b/metadata/md5-cache/sci-biology/abyss-2.3.4
@@ -11,5 +11,5 @@ LICENSE=GPL-3
 RDEPEND=dev-cpp/sparsehash dev-libs/boost:= misc-haskell? ( dev-libs/gmp:0= dev-libs/libffi:0= ) sys-cluster/openmpi dev-db/sqlite:3
 SLOT=0
 SRC_URI=https://github.com/bcgsc/abyss/archive/2.3.4.tar.gz -> abyss-2.3.4.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=498079fc466ad15118faea6d1635cce8
diff --git a/metadata/md5-cache/sci-biology/bamtools-2.5.2 b/metadata/md5-cache/sci-biology/bamtools-2.5.2
index 6be18bd3913d..832804052608 100644
--- a/metadata/md5-cache/sci-biology/bamtools-2.5.2
+++ b/metadata/md5-cache/sci-biology/bamtools-2.5.2
@@ -10,5 +10,5 @@ LICENSE=MIT
 RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
 SLOT=0/2.5.2
 SRC_URI=https://github.com/pezmaster31/bamtools/archive/v2.5.2.tar.gz -> bamtools-2.5.2.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
 _md5_=efdfbdbf4181a018ee9965d5c16be71f
diff --git a/metadata/md5-cache/sci-biology/bamtools-9999 b/metadata/md5-cache/sci-biology/bamtools-9999
index 60cb13aa06ee..90354e11b7ca 100644
--- a/metadata/md5-cache/sci-biology/bamtools-9999
+++ b/metadata/md5-cache/sci-biology/bamtools-9999
@@ -9,5 +9,5 @@ LICENSE=MIT
 PROPERTIES=live
 RDEPEND=>=dev-libs/jsoncpp-1.8.0:= sys-libs/zlib:=
 SLOT=0/9999
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
 _md5_=a2299dc6ca850c1c25582656d7586681
diff --git a/metadata/md5-cache/sci-biology/biopython-1.81-r1 b/metadata/md5-cache/sci-biology/biopython-1.81-r1
index 3f577beff8a0..98a9b8068347 100644
--- a/metadata/md5-cache/sci-biology/biopython-1.81-r1
+++ b/metadata/md5-cache/sci-biology/biopython-1.81-r1
@@ -12,5 +12,5 @@ RDEPEND=dev-python/matplotlib[python_targets_python3_10(-)?,python_targets_pytho
 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
 SLOT=0
 SRC_URI=https://files.pythonhosted.org/packages/source/b/biopython/biopython-1.81.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	optfeature	222cb475c5a4f7ae7cfb0bf510a6fe54	pypi	2eecb475512bc76e5ea9192a681b9e6b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	optfeature	222cb475c5a4f7ae7cfb0bf510a6fe54	pypi	2eecb475512bc76e5ea9192a681b9e6b
 _md5_=552dcb4529d1b3f00ef66c658dfedda2
diff --git a/metadata/md5-cache/sci-biology/bwa-0.7.17 b/metadata/md5-cache/sci-biology/bwa-0.7.17
index a2fb320d9890..52eeef2dc993 100644
--- a/metadata/md5-cache/sci-biology/bwa-0.7.17
+++ b/metadata/md5-cache/sci-biology/bwa-0.7.17
@@ -9,5 +9,5 @@ LICENSE=GPL-3
 RDEPEND=sys-libs/zlib dev-lang/perl
 SLOT=0
 SRC_URI=https://github.com/lh3/bwa/archive/v0.7.17.tar.gz -> bwa-0.7.17.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=ba2dadcc176ba326d1290485ff909d7f
diff --git a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
index b744e6a27986..a89f2e5c3af5 100644
--- a/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-cbstools-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.660.tar.gz -> embassy-cbstools-1.0.0.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=56469e1c3bb7c4baac8ad99638b59ff0
diff --git a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
index 19b7c01d0cff..1b9aa83964a8 100644
--- a/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-clustalomega-1.1.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=sci-biology/clustal-omega dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.660.tar.gz -> embassy-clustalomega-1.1.0.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=864a13621791118f794da4601dcde749
diff --git a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
index 1b057ee9d2c3..647efe85e011 100644
--- a/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domainatrix-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.660.tar.gz -> embassy-domainatrix-0.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=af29c98cab7134ba05c6d874e37d95dc
diff --git a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
index 77665cccd677..83681ea2c823 100644
--- a/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domalign-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.660.tar.gz -> embassy-domalign-0.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=677a5e171c80e94969c1ab9c0b55e283
diff --git a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
index 6e2a7d5bd3a2..2f90d9ab011d 100644
--- a/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-domsearch-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.660.tar.gz -> embassy-domsearch-0.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=e0ca10c2776835b0cd20c1b0f0721a1a
diff --git a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1 b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
index 632c73e112c8..1a75d56343d8 100644
--- a/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-emnu-1.05.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=sys-libs/ncurses:0= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.660.tar.gz -> embassy-emnu-1.05.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=a33d45b5be798e7ebfcef8c59a300c88
diff --git a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
index 2514fedfb304..199915c94b3a 100644
--- a/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-esim4-1.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.660.tar.gz -> embassy-esim4-1.0.0.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=95026ca22c2bacedf52a70b4428e7753
diff --git a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
index a90d4948abd3..789ef9826be6 100644
--- a/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-hmmer-2.3.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=sci-biology/hmmer:2 dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.660.tar.gz -> embassy-hmmer-2.3.2.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=fb64fb071ec661ab550e0b33bc78b536
diff --git a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
index 6c94c5bbfa6a..caf53d098e05 100644
--- a/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-iprscan-4.3.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.660.tar.gz -> embassy-iprscan-4.3.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=06b3cb4ecb53ada6b96c0f8fe91680e9
diff --git a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
index f3280bf3eb96..50056c00ccf2 100644
--- a/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-mse-3.0.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=sys-libs/ncurses:= dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.660.tar.gz -> embassy-mse-3.0.0.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=b6d66fbfe89f6c64f635551357dc90f4
diff --git a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1 b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
index 356691e10fa8..51a263b8d05f 100644
--- a/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-phylipnew-3.69.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2 free-noncomm
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.660.tar.gz -> embassy-phylipnew-3.69.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=93c762366f9cfe8fbfdffd0fdc0483d5
diff --git a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
index d10c5efea05e..ec5d5b364783 100644
--- a/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-signature-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.660.tar.gz -> embassy-signature-0.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=193e23282bfd7f7751d7e37988a0ec44
diff --git a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1 b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
index aad0e2fecc11..0fcaf7cc6eb1 100644
--- a/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-structure-0.1.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.660.tar.gz -> embassy-structure-0.1.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=c54138383c80476f9d515e5e2a33acaf
diff --git a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1 b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
index 6f30a7e443b5..b8f9190defc6 100644
--- a/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-topo-2.0.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.660.tar.gz -> embassy-topo-2.0.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=30ddf1c7471e11d692477ffa5a3a9956
diff --git a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1 b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
index 1d47d643bcb9..57e4373b7bc2 100644
--- a/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
+++ b/metadata/md5-cache/sci-biology/embassy-vienna-1.7.2.660-r1
@@ -11,5 +11,5 @@ LICENSE=LGPL-2 GPL-2
 RDEPEND=dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt ) >=sci-biology/emboss-6.6.0-r1[mysql=,pdf=,png=,postgres=,X=]
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.660.tar.gz -> embassy-vienna-1.7.2.660.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a
 _md5_=ba0cdfe4fa4ef35b15cb45a53f81f3b7
diff --git a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2 b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
index 31ee2f859f3f..ab329003e416 100644
--- a/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
+++ b/metadata/md5-cache/sci-biology/emboss-6.6.0-r2
@@ -12,5 +12,5 @@ PDEPEND=!minimal? ( sci-biology/aaindex sci-biology/cutg sci-biology/primer3 sci
 RDEPEND=!dev-build/cons !games-action/xbomber dev-libs/expat dev-libs/libpcre:3 sci-libs/plplot:= sys-libs/zlib mysql? ( dev-db/mysql-connector-c:0= ) pdf? ( media-libs/libharu:= ) png? ( media-libs/gd:2=[png] ) postgres? ( dev-db/postgresql:= ) X? ( x11-libs/libXt )
 SLOT=0
 SRC_URI=ftp://emboss.open-bio.org/pub/EMBOSS/EMBOSS-6.6.0.tar.gz https://dev.gentoo.org/~soap/distfiles/emboss-6.6.0-patches-r1.tar.xz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	emboss-r3	ed4c0b270092039c992b771a26ca322a	readme.gentoo-r1	204091a2cde6179cd9d3db26d09412d3
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	emboss-r3	ed4c0b270092039c992b771a26ca322a	readme.gentoo-r1	204091a2cde6179cd9d3db26d09412d3
 _md5_=ca25acac65a81d8ec16dc978ce85afe6
diff --git a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3 b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
index 2df1405d739e..8e72a5d77497 100644
--- a/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
+++ b/metadata/md5-cache/sci-biology/exonerate-2.2.0-r3
@@ -13,5 +13,5 @@ REQUIRED_USE=test? ( utils )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=10bdf3d183405e86dbde847391344239
diff --git a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1 b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
index b5cde3fc37f6..a6bdce3f67d6 100644
--- a/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
+++ b/metadata/md5-cache/sci-biology/fasta-36.3.8h-r1
@@ -10,5 +10,5 @@ LICENSE=fasta
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/wrpearson/fasta36/archive/refs/tags/v36.3.8h_04-May-2020.tar.gz -> fasta-36.3.8h.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=741f3be1a17b816aabab39443236f37b
diff --git a/metadata/md5-cache/sci-biology/fasttree-2.1.11 b/metadata/md5-cache/sci-biology/fasttree-2.1.11
index ce8a5ca9d99c..d71fc677634c 100644
--- a/metadata/md5-cache/sci-biology/fasttree-2.1.11
+++ b/metadata/md5-cache/sci-biology/fasttree-2.1.11
@@ -10,5 +10,5 @@ LICENSE=GPL-2
 REQUIRED_USE=?? ( double-precision cpu_flags_x86_sse3 )
 SLOT=0
 SRC_URI=http://www.microbesonline.org/fasttree/FastTree-2.1.11.c http://www.microbesonline.org/fasttree/FastTreeUPGMA.c -> FastTreeUPGMA-2.1.11.c http://www.microbesonline.org/fasttree/MOTreeComparison.tar.gz -> MOTreeComparison-2.1.11.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
 _md5_=4a94b8db43f0aadb5ece67757ccbe635
diff --git a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5 b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5
index bcb62069a86c..05a71457fff5 100644
--- a/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5
+++ b/metadata/md5-cache/sci-biology/hmmer-2.3.2-r5
@@ -10,5 +10,5 @@ LICENSE=GPL-2
 RESTRICT=!test? ( test )
 SLOT=2
 SRC_URI=http://eddylab.org/software/hmmer/2.3.2/hmmer-2.3.2.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=766670f9df1a2a937b1b58cf4c63931d
diff --git a/metadata/md5-cache/sci-biology/kallisto-0.46.2 b/metadata/md5-cache/sci-biology/kallisto-0.46.2
index d62b5c54c7ce..ebbff2ce4990 100644
--- a/metadata/md5-cache/sci-biology/kallisto-0.46.2
+++ b/metadata/md5-cache/sci-biology/kallisto-0.46.2
@@ -12,5 +12,5 @@ RDEPEND=sci-libs/htslib:= sys-libs/zlib:= hdf5? ( sci-libs/hdf5:= )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/pachterlab/kallisto/archive/v0.46.2.tar.gz -> kallisto-0.46.2.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
 _md5_=1b739cad0275e6dc5a320723611b78e9
diff --git a/metadata/md5-cache/sci-biology/mafft-7.490 b/metadata/md5-cache/sci-biology/mafft-7.490
index 18c33a7afc8a..a154559e53e4 100644
--- a/metadata/md5-cache/sci-biology/mafft-7.490
+++ b/metadata/md5-cache/sci-biology/mafft-7.490
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos
 LICENSE=BSD
 SLOT=0
 SRC_URI=https://mafft.cbrc.jp/alignment/software/mafft-7.490-without-extensions-src.tgz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=04971be2bc4044a9c136d12a7e51b23d
diff --git a/metadata/md5-cache/sci-biology/mosaik-2.2.30 b/metadata/md5-cache/sci-biology/mosaik-2.2.30
index 25c89979465a..4f862c4709b0 100644
--- a/metadata/md5-cache/sci-biology/mosaik-2.2.30
+++ b/metadata/md5-cache/sci-biology/mosaik-2.2.30
@@ -7,5 +7,5 @@ KEYWORDS=~amd64 ~x86
 LICENSE=GPL-2
 SLOT=0
 SRC_URI=https://github.com/wanpinglee/MOSAIK/archive/5c25216d3522d6a33e53875cd76a6d65001e4e67.tar.gz -> mosaik-2.2.30.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	vcs-snapshot	eab6d8533446763c2e9777d8bbd1594e
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	vcs-snapshot	eab6d8533446763c2e9777d8bbd1594e
 _md5_=b275a0e18dbe85d2a2e24cebc796c134
diff --git a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1 b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
index d599ecab23c6..709a7c71b949 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
+++ b/metadata/md5-cache/sci-biology/mothur-1.27.0-r1
@@ -11,5 +11,5 @@ LICENSE=GPL-3
 RDEPEND=sci-biology/uchime mpi? ( virtual/mpi ) virtual/fortran
 SLOT=0
 SRC_URI=https://www.mothur.org/w/images/c/cb/Mothur.1.27.0.zip -> mothur-1.27.0.zip
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	fortran-2	40c4450f1c4ecb2ee694d96e1958d4ea
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	fortran-2	40c4450f1c4ecb2ee694d96e1958d4ea
 _md5_=4d1c6c16f8757994256f73d5be45cb8f
diff --git a/metadata/md5-cache/sci-biology/mothur-1.48.0 b/metadata/md5-cache/sci-biology/mothur-1.48.0
index 8a5b6a11f941..e6782358cf46 100644
--- a/metadata/md5-cache/sci-biology/mothur-1.48.0
+++ b/metadata/md5-cache/sci-biology/mothur-1.48.0
@@ -10,5 +10,5 @@ LICENSE=GPL-3
 RDEPEND=sci-biology/uchime boost? ( dev-libs/boost:=[zlib] ) gsl? ( sci-libs/gsl:= ) hdf5? ( sci-libs/hdf5:=[cxx] ) mpi? ( virtual/mpi )
 SLOT=0
 SRC_URI=https://github.com/mothur/mothur/archive/refs/tags/v1.48.0.tar.gz -> mothur-1.48.0.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=2af03a020fdefd5d2d9a08ecc098d287
diff --git a/metadata/md5-cache/sci-biology/mummer-3.23-r1 b/metadata/md5-cache/sci-biology/mummer-3.23-r1
index 997e0f3ff5dc..6ecb3b270e84 100644
--- a/metadata/md5-cache/sci-biology/mummer-3.23-r1
+++ b/metadata/md5-cache/sci-biology/mummer-3.23-r1
@@ -9,5 +9,5 @@ LICENSE=Artistic
 RDEPEND=app-shells/tcsh dev-lang/perl
 SLOT=0
 SRC_URI=mirror://sourceforge/mummer/MUMmer3.23.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=7103f6fc8a8d965ba2e5b71b09010e1d
diff --git a/metadata/md5-cache/sci-biology/muscle-3.8.31 b/metadata/md5-cache/sci-biology/muscle-3.8.31
index 194dd09f7f1e..fd350e541cff 100644
--- a/metadata/md5-cache/sci-biology/muscle-3.8.31
+++ b/metadata/md5-cache/sci-biology/muscle-3.8.31
@@ -8,5 +8,5 @@ LICENSE=public-domain
 RDEPEND=!sci-libs/libmuscle
 SLOT=0
 SRC_URI=https://www.drive5.com/muscle/downloads3.8.31/muscle3.8.31_src.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=46bd2dd5a3f5b38a212ff48669d0939c
diff --git a/metadata/md5-cache/sci-biology/phylip-3.698 b/metadata/md5-cache/sci-biology/phylip-3.698
index 12d00018fc06..32850c49de98 100644
--- a/metadata/md5-cache/sci-biology/phylip-3.698
+++ b/metadata/md5-cache/sci-biology/phylip-3.698
@@ -10,5 +10,5 @@ LICENSE=BSD-2
 RDEPEND=x11-libs/libXaw !dev-lang/elixir
 SLOT=0
 SRC_URI=http://evolution.gs.washington.edu/phylip/download/phylip-3.698.zip
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=b3a777c086ea4a6cd489efcb5bde7b66
diff --git a/metadata/md5-cache/sci-biology/pysam-0.21.0 b/metadata/md5-cache/sci-biology/pysam-0.21.0
index b7066fb3205c..ad6a5d7df5ee 100644
--- a/metadata/md5-cache/sci-biology/pysam-0.21.0
+++ b/metadata/md5-cache/sci-biology/pysam-0.21.0
@@ -13,5 +13,5 @@ REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
 RESTRICT=!test? ( test )
 SLOT=0
 SRC_URI=https://github.com/pysam-developers/pysam/archive/v0.21.0.tar.gz -> pysam-0.21.0.gh.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b
 _md5_=d2f337ee806641d85739cd55c8698806
diff --git a/metadata/md5-cache/sci-biology/pysam-9999 b/metadata/md5-cache/sci-biology/pysam-9999
index b3ad16bf3bfd..69308c7ab9c3 100644
--- a/metadata/md5-cache/sci-biology/pysam-9999
+++ b/metadata/md5-cache/sci-biology/pysam-9999
@@ -12,5 +12,5 @@ RDEPEND=>=sci-libs/htslib-1.17 python_targets_python3_10? ( dev-lang/python:3.10
 REQUIRED_USE=|| ( python_targets_python3_10 python_targets_python3_11 )
 RESTRICT=!test? ( test )
 SLOT=0
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	out-of-source-utils	1a9007554652a6e627edbccb3c25a439	multibuild	d67e78a235f541871c7dfe4cf7931489	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	python-utils-r1	8904b60325f22500b0c3ad4b68a42448	python-r1	8a28fa6d3e3bc96ff8a7eff2badbe71f	distutils-r1	8262de2e5a28df8624b96e031d8d0f2b	git-r3	86fa1f157b70b9d2ff340c4633b1cf4b
 _md5_=bcdb07ed2c7ed322810daba181d02da3
diff --git a/metadata/md5-cache/sci-biology/raxml-7.2.6 b/metadata/md5-cache/sci-biology/raxml-7.2.6
index 3519796a297c..c0b0def51155 100644
--- a/metadata/md5-cache/sci-biology/raxml-7.2.6
+++ b/metadata/md5-cache/sci-biology/raxml-7.2.6
@@ -9,5 +9,5 @@ LICENSE=GPL-2
 REQUIRED_USE=cpu_flags_x86_sse3
 SLOT=0
 SRC_URI=http://wwwkramer.in.tum.de/exelixis/software/RAxML-7.2.6.tar.bz2
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=14b77d8b019468c10a65f1358be0d8ae
diff --git a/metadata/md5-cache/sci-biology/seqan-3.1.0 b/metadata/md5-cache/sci-biology/seqan-3.1.0
index 2d844a3b4a03..75d0e56ec5a2 100644
--- a/metadata/md5-cache/sci-biology/seqan-3.1.0
+++ b/metadata/md5-cache/sci-biology/seqan-3.1.0
@@ -12,5 +12,5 @@ RDEPEND=app-arch/bzip2:= dev-cpp/range-v3 dev-libs/cereal sci-libs/lemon sys-lib
 REQUIRED_USE=cpu_flags_x86_sse4_2
 SLOT=0
 SRC_URI=https://github.com/seqan/seqan3/releases/download/3.1.0/seqan3-3.1.0-Source.tar.xz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
 _md5_=327a33751512d78b13d5acd641ba3385
diff --git a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3 b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
index d9072d0f61ce..af0f04dd0368 100644
--- a/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
+++ b/metadata/md5-cache/sci-biology/t-coffee-11.00-r3
@@ -8,5 +8,5 @@ LICENSE=GPL-2
 RDEPEND=sci-biology/clustalw sci-chemistry/tm-align
 SLOT=0
 SRC_URI=http://www.tcoffee.org/Packages/Beta/Latest/T-COFFEE_distribution_Version_11.00.4466924.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=489f3794f3d0f3e0bf26ffb6c031578d
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
index 0d0f6aa6c5bf..9e481e98baab 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1-r3
@@ -10,5 +10,5 @@ LICENSE=GPL-2
 RDEPEND=x11-libs/wxGTK:3.0[X]
 SLOT=0
 SRC_URI=http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/0.5/tv-0.5.1.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	wxwidgets	9a707a3f9f1ea7aa703b1e46552291e5
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	wxwidgets	9a707a3f9f1ea7aa703b1e46552291e5
 _md5_=c7a6fb1f3ee6436d674328487c021a24
diff --git a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4 b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
index 5d8f1d2766fc..061fb5a77ffc 100644
--- a/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
+++ b/metadata/md5-cache/sci-biology/treeviewx-0.5.1.20100823_p4
@@ -10,5 +10,5 @@ LICENSE=GPL-2
 RDEPEND=x11-libs/wxGTK:3.2-gtk3[X]
 SLOT=0
 SRC_URI=https://github.com/rdmpage/treeviewx/archive/7e4d0e96dfdde51a92a1634b41d7284142a19afa.tar.gz -> treeviewx-0.5.1.20100823_p4.tar.gz mirror://debian/pool/main/t/treeviewx/treeviewx_0.5.1+git20100823.7e4d0e9-4.debian.tar.xz https://dev.gentoo.org/~pacho/treeviewx/treeviewx_128.png
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	desktop	021728fdc1b03b36357dbc89489e0f0d	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	wxwidgets	9a707a3f9f1ea7aa703b1e46552291e5
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	desktop	021728fdc1b03b36357dbc89489e0f0d	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	wxwidgets	9a707a3f9f1ea7aa703b1e46552291e5
 _md5_=e2772b24de3b6a5dd5f2a01d4d9d90db
diff --git a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3 b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
index 6a696cd2c826..608cf50f37f6 100644
--- a/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
+++ b/metadata/md5-cache/sci-biology/trnascan-se-1.31-r3
@@ -9,5 +9,5 @@ LICENSE=GPL-2
 RDEPEND=dev-lang/perl:=
 SLOT=0
 SRC_URI=http://lowelab.ucsc.edu/software/tRNAscan-SE.tar.gz -> trnascan-se-1.31.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	perl-functions	c3fca037246e877693badea0df3b0ef8
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	perl-functions	c3fca037246e877693badea0df3b0ef8
 _md5_=52e449bd6a1f0b9bd42d7eaedfc1d9e6
diff --git a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1 b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
index 2d370f072050..542193f636dd 100644
--- a/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
+++ b/metadata/md5-cache/sci-biology/uchime-4.2.40-r1
@@ -8,5 +8,5 @@ KEYWORDS=amd64 ~x86 ~amd64-linux ~x86-linux
 LICENSE=public-domain
 SLOT=0
 SRC_URI=https://www.drive5.com/uchime/uchime4.2.40_src.tar.gz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	multiprocessing	30ead54fa2e2b5f9cd4e612ffc34d0fe	ninja-utils	2df4e452cea39a9ec8fb543ce059f8d6	xdg-utils	baea6080dd821f5562d715887954c9d3	cmake	c7c9a62d6232cac66d4ea32d575c3e7c
 _md5_=d6d5b7ba215fd8eaf51d3847f4051df6
diff --git a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1 b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
index 72775cc33bf3..004850e739d8 100644
--- a/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
+++ b/metadata/md5-cache/sci-biology/ucsc-genome-browser-260-r1
@@ -11,5 +11,5 @@ RDEPEND=dev-libs/openssl:0= media-libs/libpng:0= !<sci-biology/ucsc-genome-brows
 REQUIRED_USE=server? ( mysql )
 SLOT=0
 SRC_URI=http://hgdownload.cse.ucsc.edu/admin/jksrc.v260.zip
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	eqawarn	c9847c43b3253a276ae2eabddedab3d7	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	webapp	de2d3d345b44597c10d7104a7bcdf7b2
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	eqawarn	c9847c43b3253a276ae2eabddedab3d7	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	webapp	de2d3d345b44597c10d7104a7bcdf7b2
 _md5_=35cb93e40ad2d78c190e860dd3944557
diff --git a/metadata/md5-cache/sci-biology/vcftools-0.1.16 b/metadata/md5-cache/sci-biology/vcftools-0.1.16
index c98cbc7324de..a5b24b840e8f 100644
--- a/metadata/md5-cache/sci-biology/vcftools-0.1.16
+++ b/metadata/md5-cache/sci-biology/vcftools-0.1.16
@@ -11,5 +11,5 @@ LICENSE=LGPL-3
 RDEPEND=sys-libs/zlib dev-lang/perl:= lapack? ( virtual/lapack )
 SLOT=0
 SRC_URI=https://github.com/vcftools/vcftools/releases/download/v0.1.16/vcftools-0.1.16.tar.gz
-_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	24c947ff5f858625cf0b33c15eed4425	perl-functions	c3fca037246e877693badea0df3b0ef8
+_eclasses_=gnuconfig	b6b3e92f8b8c996400074b5f61a59256	toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	libtool	5f49a16f67f81bdf873e3d1f10b10001	autotools	3af8f60c4bdb23e738db506a630898ee	flag-o-matic	288c54efeb5e2aa70775e39032695ad4	perl-functions	c3fca037246e877693badea0df3b0ef8
 _md5_=faeb202e0aded0cb660ea87d6d7be81b
diff --git a/metadata/md5-cache/sci-biology/velvet-1.2.10 b/metadata/md5-cache/sci-biology/velvet-1.2.10
index b1b33d8872fc..df2b6aa53673 100644
--- a/metadata/md5-cache/sci-biology/velvet-1.2.10
+++ b/metadata/md5-cache/sci-biology/velvet-1.2.10
@@ -9,5 +9,5 @@ KEYWORDS=~amd64 ~x86
 LICENSE=GPL-2
 SLOT=0
 SRC_URI=https://www.ebi.ac.uk/~zerbino/velvet/velvet_1.2.10.tgz
-_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	24c947ff5f858625cf0b33c15eed4425
+_eclasses_=toolchain-funcs	e56c7649b804f051623c8bc1a1c44084	multilib	c19072c3cd7ac5cb21de013f7e9832e0	flag-o-matic	288c54efeb5e2aa70775e39032695ad4
 _md5_=f48eb0348a1ac91d41dde22d3ced2ea1