summaryrefslogtreecommitdiff
blob: 562a17b430b4b8a6ba86be2e0310186fc0ff63ae (plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
# ChangeLog for sci-biology/clustalx
# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
# $Header: /var/cvsroot/gentoo-x86/sci-biology/clustalx/ChangeLog,v 1.27 2012/10/24 19:29:39 ulm Exp $

  24 Oct 2012; Ulrich Müller <ulm@gentoo.org> clustalx-1.83-r2.ebuild:
  Update dependency after package move from x11-libs/openmotif to
  x11-libs/motif.

  13 Jun 2012; Justin Lecher <jlec@gentoo.org> clustalx-1.83-r2.ebuild:
  Cleaned old

  13 Jun 2012; Johannes Huber <johu@gentoo.org> -clustalx-2.0.11.ebuild:
  Remove old wrt bug #311481.

  13 Jun 2012; Johannes Huber <johu@gentoo.org> clustalx-2.1.ebuild:
  Stable for x86, wrt bug #416891

  04 Jun 2012; Agostino Sarubbo <ago@gentoo.org> clustalx-2.1.ebuild:
  Stable for amd64, wrt bug #416891

*clustalx-2.1 (22 Apr 2012)

  22 Apr 2012; Kacper Kowalik <xarthisius@gentoo.org> +clustalx-2.1.ebuild:
  Version bump wrt #410163 by Michael (kensington) <gentoo@scribeofthenile.com>

  10 Oct 2010; Ulrich Mueller <ulm@gentoo.org> clustalx-1.83-r2.ebuild:
  Fix openmotif dependency.

  31 Oct 2009; Markus Meier <maekke@gentoo.org> clustalx-2.0.11.ebuild:
  amd64/x86 stable, bug #290938

*clustalx-2.0.11 (28 Apr 2009)

  28 Apr 2009; Andrey Kislyuk <weaver@gentoo.org>
  -files/clustalx-2.0.9-gcc4.3.patch, metadata.xml, -clustalx-2.0.9.ebuild,
  +clustalx-2.0.11.ebuild:
  Version bump, fix bug 261278, remove old, assume maintainership

  24 Mar 2009; Olivier Fisette <ribosome@gentoo.org> metadata.xml:
  Giving up maintainership of this package.

  09 Sep 2008; Markus Dittrich <markusle@gentoo.org>
  +files/clustalx-2.0.9-gcc4.3.patch, clustalx-2.0.9.ebuild:
  Added patch to fix gcc-4.3 header issue (bug #237077). Relaxed
  dependency on full qt:4 to qt-gui:4 only which should be
  sufficient. Finally, keyworded the 2.0.9 ebuild amd64 since it 
  works fine.

*clustalx-2.0.9 (28 Aug 2008)

  28 Aug 2008; Olivier Fisette <ribosome@gentoo.org> +clustalx-2.0.9.ebuild:
  New upstream version (complete rewrite based on Qt).

  27 Aug 2008; Olivier Fisette <ribosome@gentoo.org>
  clustalx-1.83-r2.ebuild:
  Depend on ClustalW 1.x as ClustalX 2.x will soon enter Portage.

  26 Aug 2008; Olivier Fisette <ribosome@gentoo.org>
  clustalx-1.83-r2.ebuild:
  Added missing libXpm dependency. Fixes bug #233046.

  27 Jun 2008; Ulrich Mueller <ulm@gentoo.org> clustalx-1.83-r2.ebuild:
  Change dependency from virtual/motif to x11-libs/openmotif, bug 224749.

  24 Oct 2006; Jeff Gardner <je_fro@gentoo.org> clustalx-1.83-r2.ebuild:
  Keywording ~sparc

  01 Feb 2006; Donnie Berkholz <spyderous@gentoo.org>;
  clustalx-1.83-r2.ebuild:
  Fix deps for modular X.

  21 Jan 2006; Olivier Fisette <ribosome@gentoo.org>
  -clustalx-1.83-r1.ebuild:
  Removed obsolete version.

  23 Dec 2005; Simon Stelling <blubb@gentoo.org> clustalx-1.83-r2.ebuild:
  stable on amd64

  15 Dec 2005; Joshua Jackson <tsunam@gentoo.org> clustalx-1.83-r2.ebuild:
  Stable on x86 for bug #115442

*clustalx-1.83-r2 (13 Nov 2005)

  13 Nov 2005; Olivier Fisette <ribosome@gentoo.org>
  +clustalx-1.83-r2.ebuild:
  Added check for X support in the NCBI toolkit, as suggested by Brady
  Catherman <bradyc@uidaho.edu> (fixes bug #112336).

  02 Jun 2005; Olivier Fisette <ribosome@gentoo.org>
  clustalx-1.83-r1.ebuild:
  Use "virtual/motif" instead of "x11-libs/openmotif".

*clustalx-1.83-r1 (16 Feb 2005)

  16 Feb 2005; Olivier Fisette <ribosome@gentoo.org>
  +clustalx-1.83-r1.ebuild, -clustalx-1.83.ebuild:
  Fixes bug #82211: ClustalX is incompatible with OpenMotif 2.2.

  30 Jan 2005; Olivier Fisette <ribosome@gentoo.org> clustalx-1.83.ebuild:
  Ebuild cleanup.

  18 Jan 2005; Olivier Fisette <ribosome@gentoo.org> clustalx-1.83.ebuild:
  Added to x86.

*clustalx-1.83 (23 Dec 2004)

  23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
  +clustalx-1.83.ebuild:
  Moved from app-sci/clustalx to sci-biology/clustalx.

  22 Nov 2004; Karol Wojtaszek <sekretarz@gentoo.org> clustalx-1.83.ebuild:
  Added to ~amd64, bug #72084

  18 Nov 2004; Michael Sterrett <mr_bones_@gentoo.org> clustalx-1.83.ebuild:
  needs stable app-sci/ncbi-tools first

  17 Nov 2004; Olivier Fisette <ribosome@gentoo.org> clustalx-1.83.ebuild:
  Added to x86. Use toolchain-funcs rather than the gcc eclass.

  14 Oct 2004; Olivier Fisette <ribosome@gentoo.org> clustalx-1.83.ebuild:
  Use gcc.eclass rather than ${CC}.

*clustalx-1.83 (06 Oct 2004)

  06 Oct 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
  +clustalx-1.83.ebuild:
  Initial import.