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--- setup.py.old 2007-03-17 15:21:04.000000000 -0400
+++ setup.py 2007-05-17 14:02:42.000000000 -0400
@@ -64,6 +64,7 @@
_CHECKED = check_dependencies()
return _CHECKED
+USE_KDTREE = False
def check_dependencies():
"""Return whether the installation should continue."""
# There should be some way for the user to tell specify not to
@@ -112,15 +113,8 @@
# Compile KDTree ? Not compiled by default
- print "\n*** Bio.KDTree *** NOT built by default "
- kdtree_msg = """
-The Bio.PDB.NeighborSearch module depends on the Bio.KDTree module,
-which in turn, depends on C++ code that does not compile cleanly on
-all platforms. Hence, Bio.KDTree is not built by default.
-
-Would you like to build Bio.KDTree ?"""
-
- if get_yes_or_no (kdtree_msg, 0):
+ global USE_KDTREE
+ if USE_KDTREE:
NUMPY_PACKAGES.append("Bio.KDTree")
NUMPY_EXTENSIONS.append(
CplusplusExtension('Bio.KDTree._CKDTree',
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