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-rw-r--r--sci-biology/seaview/ChangeLog6
-rw-r--r--sci-biology/seaview/Manifest24
-rw-r--r--sci-biology/seaview/files/digest-seaview-200602133
-rw-r--r--sci-biology/seaview/files/digest-seaview-200709193
-rw-r--r--sci-biology/seaview/seaview-20060213.ebuild46
-rw-r--r--sci-biology/seaview/seaview-20070919.ebuild52
6 files changed, 9 insertions, 125 deletions
diff --git a/sci-biology/seaview/ChangeLog b/sci-biology/seaview/ChangeLog
index 6074a4c31199..2c54932284ec 100644
--- a/sci-biology/seaview/ChangeLog
+++ b/sci-biology/seaview/ChangeLog
@@ -1,6 +1,10 @@
# ChangeLog for sci-biology/seaview
# Copyright 2000-2007 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.16 2007/12/19 07:38:37 je_fro Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/ChangeLog,v 1.17 2007/12/22 22:01:18 je_fro Exp $
+
+ 22 Dec 2007; <jeff@gentoo.org> -seaview-20060213.ebuild,
+ -seaview-20070919.ebuild:
+ Removing obsolete versions
*seaview-2.2 (19 Dec 2007)
diff --git a/sci-biology/seaview/Manifest b/sci-biology/seaview/Manifest
index 03a55c03e477..cc2f087e554d 100644
--- a/sci-biology/seaview/Manifest
+++ b/sci-biology/seaview/Manifest
@@ -3,8 +3,6 @@ MD5 bb0252cbbaa26ea6d15e7ad7f720b503 files/seaview.desktop 188
RMD160 e7b97646c16bcf57a032c83ad9dad7d7912b769e files/seaview.desktop 188
SHA256 cdcb6a86d2c21a3a74a684aed28398b869d5dcd878385c30bf84f91e83446d30 files/seaview.desktop 188
DIST seaview-20041220.tar.bz2 115192 RMD160 a557e906c9115db74ddfdecc4fdc647df336b3c3 SHA1 f237a7ccc0ba7e69c6b61a6aaac4ae4d0be12c71 SHA256 045b09e08d49f9630243e3bc19d8cc630874e1c4f64a1d91997e76e5af2cd6d7
-DIST seaview-20060213.tar.bz2 114995 RMD160 c3409b5e06f15e983db4912812381ee5d5894ea9 SHA1 6dffddf934e82eb155e47dcd58f9a5612511fcff SHA256 be058f53f07cec46978f10ddad8794bbe79762cf089d18b5cbe7cb6ed15c54fc
-DIST seaview-20070919.tar.bz2 129867 RMD160 a930e5286c8e2c82dd1b7d33f15682b525a83f4f SHA1 db2d36e6ef7cd446caf79cb93258c3b72b067248 SHA256 4c2b3d1e051f72194dc1b7fc742ed92c97f86926615fbd768b2f2e3cff7fea33
DIST seaview_2.2.tar.gz 155877 RMD160 59b9b0782138a2c46a6fec36cf15042b37aa72de SHA1 d38191022bfe95112460800a1fc1dcefbc761bec SHA256 ad1d7a66dcc5f97538b2d51e3a4e91295476c1fdd2b8877073bd12bab4d86d99
EBUILD seaview-2.2.ebuild 1358 RMD160 44e17398b6ea3be32d9545db96cb16683c4c2f3a SHA1 e746ebfa954c4bdc5b119d8e9a43556942faf841 SHA256 06330692de7962f6289c34711ad4bb5c3c024658777abed77b1bf3fae770267f
MD5 a3113b8a30fc20f193aaaa4601b0a91e seaview-2.2.ebuild 1358
@@ -14,18 +12,10 @@ EBUILD seaview-20041220.ebuild 1251 RMD160 8442894ac4b6677ede0ad4c16b3811f9b75fe
MD5 08ec0631100adb67aaba3be99b50fac4 seaview-20041220.ebuild 1251
RMD160 8442894ac4b6677ede0ad4c16b3811f9b75feec9 seaview-20041220.ebuild 1251
SHA256 7525d4b7acc91570afc0d834f578ee914efd621861973c6870618a05517ffa8d seaview-20041220.ebuild 1251
-EBUILD seaview-20060213.ebuild 1278 RMD160 c34fab8aab79e7575f4795d8be807e943615da73 SHA1 7724e43669e984f2bffea939e37c3f2ff7ce44d4 SHA256 30b758ea8a1fea7999793939592558dc8d148f491ea8fc17ec1ed12ccea6ccae
-MD5 5239206616d1286f408af85c91e5a146 seaview-20060213.ebuild 1278
-RMD160 c34fab8aab79e7575f4795d8be807e943615da73 seaview-20060213.ebuild 1278
-SHA256 30b758ea8a1fea7999793939592558dc8d148f491ea8fc17ec1ed12ccea6ccae seaview-20060213.ebuild 1278
-EBUILD seaview-20070919.ebuild 1400 RMD160 185c09dbfd7aebc59378ae2120a895eb392bdb25 SHA1 667482cb92637986c5278fe3ddf175f82ab9252b SHA256 7ec52ab965ad32515c111688916441d86ca8cd262ece5974ff736db37cdfc8ab
-MD5 7a51ed6f791962db3638740ec5bde158 seaview-20070919.ebuild 1400
-RMD160 185c09dbfd7aebc59378ae2120a895eb392bdb25 seaview-20070919.ebuild 1400
-SHA256 7ec52ab965ad32515c111688916441d86ca8cd262ece5974ff736db37cdfc8ab seaview-20070919.ebuild 1400
-MISC ChangeLog 3179 RMD160 dc8177db2f04db09e6834b64ded9e2a32b662715 SHA1 f78db3f3b37ae04564d657333fa63d9d2a9252f7 SHA256 e71727753149f606f46e2ef9a1070088fd2a6656cc8ba3460a5e7943fd3957fd
-MD5 c80047a340aa3f840e8c37248ba7b812 ChangeLog 3179
-RMD160 dc8177db2f04db09e6834b64ded9e2a32b662715 ChangeLog 3179
-SHA256 e71727753149f606f46e2ef9a1070088fd2a6656cc8ba3460a5e7943fd3957fd ChangeLog 3179
+MISC ChangeLog 3296 RMD160 aa32cb6b0bdeb72f12d53df05358f6b6d22a46ff SHA1 189dd59e007c16e4c035306ddc912d1d6637a68a SHA256 d41807baf15fe061af978506c121d3e5241bbc73c2cb86e806ee7c7844ee5eb8
+MD5 ea00f0c3aef538589f9e2aa316b2257c ChangeLog 3296
+RMD160 aa32cb6b0bdeb72f12d53df05358f6b6d22a46ff ChangeLog 3296
+SHA256 d41807baf15fe061af978506c121d3e5241bbc73c2cb86e806ee7c7844ee5eb8 ChangeLog 3296
MISC metadata.xml 622 RMD160 971008c946d3c492a86c946d8be5ed7881981600 SHA1 4a772f6c65f56de1a01eb770bc3b00998e8fc793 SHA256 a1d62029203598fbf7b1f3d97d004ff7fccf30246276ff8f9ba99b7696691529
MD5 62b43c9f7320b7c9c27eac02b2644cd5 metadata.xml 622
RMD160 971008c946d3c492a86c946d8be5ed7881981600 metadata.xml 622
@@ -36,9 +26,3 @@ SHA256 e4b522345bdf014d57eda6efdaefe1b248c01324c3a6b3f90a5c32d3ef3d2d36 files/di
MD5 5b1989dfbbf9ea843666ea3218872d1e files/digest-seaview-20041220 253
RMD160 49aefa5d6c963205cbe4ff5a47d5045f21f0d079 files/digest-seaview-20041220 253
SHA256 36bbcb192079998e4b6b5601cdba9d35fe7a8cf850cfb97b4d5cc93ea11e90e8 files/digest-seaview-20041220 253
-MD5 12f7be8bda68958f3fd458149b5cdb6a files/digest-seaview-20060213 253
-RMD160 2c5874f5e8f1e778044c4f1c462ae158c9aaaf25 files/digest-seaview-20060213 253
-SHA256 b91aecb8cac59c15a14b1e5f925c8b065f3a929f636adbea74e5331fbe4153e5 files/digest-seaview-20060213 253
-MD5 45aa688396038db1079a932bd2cdf57c files/digest-seaview-20070919 253
-RMD160 530dd5235936f0920209c8e101fb5b8aee19de28 files/digest-seaview-20070919 253
-SHA256 798c5db6eb97a43719bc4bff4bab0e0043b1cb7cf3c72c092b9d256dd3229e9d files/digest-seaview-20070919 253
diff --git a/sci-biology/seaview/files/digest-seaview-20060213 b/sci-biology/seaview/files/digest-seaview-20060213
deleted file mode 100644
index 331a45c8c96d..000000000000
--- a/sci-biology/seaview/files/digest-seaview-20060213
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 f44a1ea1ef0922e97fb26cbfeb80ca9d seaview-20060213.tar.bz2 114995
-RMD160 c3409b5e06f15e983db4912812381ee5d5894ea9 seaview-20060213.tar.bz2 114995
-SHA256 be058f53f07cec46978f10ddad8794bbe79762cf089d18b5cbe7cb6ed15c54fc seaview-20060213.tar.bz2 114995
diff --git a/sci-biology/seaview/files/digest-seaview-20070919 b/sci-biology/seaview/files/digest-seaview-20070919
deleted file mode 100644
index e8fa4d2c65e9..000000000000
--- a/sci-biology/seaview/files/digest-seaview-20070919
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 aa7a0d87d2cf4a69d3b639ac9c1aef06 seaview-20070919.tar.bz2 129867
-RMD160 a930e5286c8e2c82dd1b7d33f15682b525a83f4f seaview-20070919.tar.bz2 129867
-SHA256 4c2b3d1e051f72194dc1b7fc742ed92c97f86926615fbd768b2f2e3cff7fea33 seaview-20070919.tar.bz2 129867
diff --git a/sci-biology/seaview/seaview-20060213.ebuild b/sci-biology/seaview/seaview-20060213.ebuild
deleted file mode 100644
index b6d5509117b3..000000000000
--- a/sci-biology/seaview/seaview-20060213.ebuild
+++ /dev/null
@@ -1,46 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20060213.ebuild,v 1.4 2007/10/21 16:41:08 je_fro Exp $
-
-inherit toolchain-funcs multilib
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="~x86 ~ppc ~amd64"
-IUSE=""
-
-DEPEND="x11-libs/fltk
- =media-libs/pdflib-6.0*
- sci-biology/clustalw"
-
-src_unpack() {
- unpack ${A}
- cd "${S}"
-
- sed -i \
- -e "s%\"seaview.help\", %\"/usr/share/${PN}/seaview.help\", %" seaview.cxx || die
-
- # Respect CXXFLAGS. Package uses CFLAGS as CXXFLAGS.
- # Fix invocation of C++ compiler.
- # Fix include and library paths.
- sed -i \
- -e '/^FLTK/d' \
- -e '/^X11/d' \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e 's:-I$(FLTK):-I/usr/include/fltk-1.1:' \
- -e 's:-I$(X11)/include:-I/usr/include/X11R6:' \
- -e "s:\(^CFLAGS .*\):\1 ${CXXFLAGS}:" \
- -e "s:-L\$(FLTK)/lib:-L/usr/$(get_libdir)/fltk-1.1:" \
- -e "s:-L\$(X11)/lib:-L/usr/$(get_libdir)/X11:" \
- Makefile || die
-}
-
-src_install() {
- dobin seaview seaview_align.sh
- insinto /usr/share/${PN}
- doins protein.mase seaview.help
-}
diff --git a/sci-biology/seaview/seaview-20070919.ebuild b/sci-biology/seaview/seaview-20070919.ebuild
deleted file mode 100644
index 8bf403f5cb37..000000000000
--- a/sci-biology/seaview/seaview-20070919.ebuild
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/seaview/seaview-20070919.ebuild,v 1.5 2007/10/22 23:23:42 je_fro Exp $
-
-inherit toolchain-funcs multilib
-
-DESCRIPTION="A graphical multiple sequence alignment editor"
-HOMEPAGE="http://pbil.univ-lyon1.fr/software/seaview.html"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="~x86 ~ppc ~amd64"
-IUSE=""
-
-DEPEND="x11-libs/fltk
- media-libs/pdflib
- sci-biology/clustalw
- sci-biology/muscle"
-
-src_unpack() {
- unpack ${A}
- cd "${S}"
-
- # Respect CXXFLAGS. Package uses CFLAGS as CXXFLAGS.
- # Fix invocation of C++ compiler.
- # Fix include and library paths.
- sed -i \
- -e '/^FLTK/d' \
- -e '/^X11/d' \
- -e 's:#HELP_NOT:HELP_NOT:' \
- -e "s:bge\/mgouy\/seaview:usr/share/${PN}:" \
- -e "s:^CXX.*:CXX = $(tc-getCXX):" \
- -e 's:-I$(FLTK):-I/usr/include/fltk-1.1:' \
- -e 's:-I$(X11)/include:-I/usr/include/X11R6:' \
- -e "s:\(^CFLAGS .*\):\1 ${CXXFLAGS}:" \
- -e "s:-L\$(FLTK)/lib:-L/usr/$(get_libdir)/fltk-1.1:" \
- -e "s:-L\$(X11)/lib:-L/usr/$(get_libdir)/X11:" \
- Makefile || die
-}
-
-src_install() {
- dobin seaview seaview_align.sh
- insinto /usr/share/${PN}
- doins protein.mase seaview.help
-
- insinto /usr/share/pixmaps/
- doins "${S}/${PN}.xpm"
-
- insinto /usr/share/applications/
- doins "${FILESDIR}/${PN}.desktop"
-}