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-rw-r--r--app-sci/bioperl/bioperl-1.0.2.ebuild17
-rw-r--r--app-sci/bioperl/bioperl-1.2.2.ebuild18
-rw-r--r--app-sci/bioperl/bioperl-1.2.ebuild16
-rw-r--r--app-sci/blas/blas-19980702.ebuild16
-rw-r--r--app-sci/chemtool/chemtool-1.5.ebuild6
-rw-r--r--app-sci/chemtool/chemtool-1.6.ebuild8
-rw-r--r--app-sci/euler/euler-1.59.1.ebuild13
-rw-r--r--app-sci/euler/euler-1.60.6.ebuild11
-rw-r--r--app-sci/ghemical/ghemical-0.90.ebuild26
-rw-r--r--app-sci/ghemical/ghemical-1.00.ebuild22
-rw-r--r--app-sci/kconvert/kconvert-1.1.ebuild20
-rw-r--r--app-sci/kmatplot/kmatplot-0.4-r1.ebuild10
-rw-r--r--app-sci/kmatplot/kmatplot-0.4.ebuild10
-rw-r--r--app-sci/lapack/lapack-3.0.ebuild16
-rw-r--r--app-sci/mpqc/mpqc-2.1.2.ebuild11
-rw-r--r--app-sci/predict/predict-2.2.1.ebuild9
-rw-r--r--app-sci/raster3d/raster3d-2.6e.ebuild20
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.4.2.ebuild19
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.5.ebuild22
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.6.3.ebuild21
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.6.8.ebuild21
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.6.ebuild21
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.7.1.ebuild21
-rw-r--r--app-sci/xdrawchem/xdrawchem-1.7.3.ebuild21
24 files changed, 172 insertions, 223 deletions
diff --git a/app-sci/bioperl/bioperl-1.0.2.ebuild b/app-sci/bioperl/bioperl-1.0.2.ebuild
index c8880d881f55..90a2baf69cec 100644
--- a/app-sci/bioperl/bioperl-1.0.2.ebuild
+++ b/app-sci/bioperl/bioperl-1.0.2.ebuild
@@ -1,19 +1,18 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.0.2.ebuild,v 1.4 2003/07/02 12:33:39 aliz Exp $
-
-IUSE="mysql gd"
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.0.2.ebuild,v 1.5 2003/08/05 18:30:14 vapier Exp $
inherit perl-module
-
-S=${WORKDIR}/${P}
CATEGORY="app-sci"
-DESCRIPTION="The Bioperl Project is a collection of tools for bioinformatics, genomics and life science research."
+
+DESCRIPTION="collection of tools for bioinformatics, genomics and life science research"
+HOMEPAGE="http://www.bioperl.org/"
SRC_URI="http://bioperl.org/DIST/${P}.tar.gz"
-HOMEPAGE="http://www.bioperl.org"
LICENSE="Artistic | GPL-2"
+SLOT="0"
KEYWORDS="x86 ~ppc ~sparc ~alpha"
+IUSE="mysql gd"
DEPEND="dev-perl/File-Temp
dev-perl/HTML-Parser
@@ -31,8 +30,6 @@ DEPEND="dev-perl/File-Temp
gd? ( >=dev-perl/GD-1.32-r1 )
mysql? ( >=dev-perl/DBD-mysql-2.1004-r3 )"
-SLOT="0"
-
src_compile() {
# there's a test to run for BioGFFDB if using mysql
# note: these echo's are for the default values for testing. Not that we're
diff --git a/app-sci/bioperl/bioperl-1.2.2.ebuild b/app-sci/bioperl/bioperl-1.2.2.ebuild
index 6a4be8dcac02..1d7ad01eed4e 100644
--- a/app-sci/bioperl/bioperl-1.2.2.ebuild
+++ b/app-sci/bioperl/bioperl-1.2.2.ebuild
@@ -1,25 +1,20 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.2.2.ebuild,v 1.2 2003/08/03 16:53:37 sediener Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.2.2.ebuild,v 1.3 2003/08/05 18:30:14 vapier Exp $
-IUSE="mysql gd"
-
-inherit perl-module
-inherit eutils
-
-S=${WORKDIR}/${P}
+inherit perl-module eutils
CATEGORY="app-sci"
-DESCRIPTION="The Bioperl Project is a collection of tools for bioinformatics, genomics and life science research."
+DESCRIPTION="collection of tools for bioinformatics, genomics and life science research"
+HOMEPAGE="http://www.bioperl.org/"
#SRC_URI="http://www.cpan.org/modules/by-module/Bio/${P}.tar.gz"
SRC_URI="http://www.bioperl.org/ftp/DIST/${P}.tar.gz"
-HOMEPAGE="http://www.bioperl.org/"
-SLOT="0"
LICENSE="Artistic GPL-2"
+SLOT="0"
KEYWORDS="~x86"
+IUSE="mysql gd"
-#DEPEND=${DEPEND}
DEPEND="${DEPEND}
dev-perl/File-Temp
dev-perl/HTML-Parser
@@ -37,7 +32,6 @@ DEPEND="${DEPEND}
dev-perl/Text-Shellwords
gd? ( >=dev-perl/GD-1.32-r1 )
mysql? ( >=dev-perl/DBD-mysql-2.1004-r3 )"
-RDEPEND=${RDEPEND}
src_unpack() {
unpack ${A}
diff --git a/app-sci/bioperl/bioperl-1.2.ebuild b/app-sci/bioperl/bioperl-1.2.ebuild
index 9264da29abca..4b2bb3fcbca7 100644
--- a/app-sci/bioperl/bioperl-1.2.ebuild
+++ b/app-sci/bioperl/bioperl-1.2.ebuild
@@ -1,20 +1,17 @@
# Copyright 2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.2.ebuild,v 1.2 2003/06/07 01:22:13 avenj Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/bioperl/bioperl-1.2.ebuild,v 1.3 2003/08/05 18:30:14 vapier Exp $
inherit perl-module debug
-S="${WORKDIR}/bioperl-${PV}"
-IUSE="mysql gd"
-
-DESCRIPTION="The Bioperl Project is a collection of tools for bioinformatics, genomics and life science research."
-
-HOMEPAGE="http://www.bioperl.org"
+DESCRIPTION="collection of tools for bioinformatics, genomics and life science research"
+HOMEPAGE="http://www.bioperl.org/"
SRC_URI="http://bioperl.org/ftp/DIST/${P}.tar.gz"
+LICENSE="Artistic GPL-2"
SLOT="0"
KEYWORDS="x86 ~ppc ~sparc ~alpha"
-LICENSE="Artistic GPL-2"
+IUSE="mysql gd"
DEPEND="dev-perl/File-Temp
dev-perl/Graph
@@ -58,6 +55,7 @@ src_compile() {
# This dies at RootIO.t:
# perl-module_src_test || die "test failed"
}
+
src_install() {
mydoc="AUTHORS BUGS FAQ"
perl-module_src_install
diff --git a/app-sci/blas/blas-19980702.ebuild b/app-sci/blas/blas-19980702.ebuild
index 77fad04c9765..00ee5d4e5d08 100644
--- a/app-sci/blas/blas-19980702.ebuild
+++ b/app-sci/blas/blas-19980702.ebuild
@@ -1,18 +1,18 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/blas/blas-19980702.ebuild,v 1.3 2003/02/13 09:21:08 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/blas/blas-19980702.ebuild,v 1.4 2003/08/05 18:31:05 vapier Exp $
-SLOT="0"
-HOMEPAGE="http://www.netlib.org/blas/"
DESCRIPTION="Basic Linear Algebra Subprograms"
+HOMEPAGE="http://www.netlib.org/blas/"
SRC_URI="http://www.netlib.org/blas/${PN}.tgz"
-DEPEND="virtual/glibc"
-KEYWORDS="x86"
LICENSE="public-domain"
-IUSE=""
+SLOT="0"
+KEYWORDS="x86"
+
+DEPEND="virtual/glibc"
-S="${WORKDIR}"
+S=${WORKDIR}
src_compile() {
cp ${FILESDIR}/Makefile ./
diff --git a/app-sci/chemtool/chemtool-1.5.ebuild b/app-sci/chemtool/chemtool-1.5.ebuild
index 546712c37ea0..c78cc2bdfaae 100644
--- a/app-sci/chemtool/chemtool-1.5.ebuild
+++ b/app-sci/chemtool/chemtool-1.5.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/chemtool/chemtool-1.5.ebuild,v 1.5 2003/04/18 17:12:23 seemant Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/chemtool/chemtool-1.5.ebuild,v 1.6 2003/08/05 18:31:42 vapier Exp $
[ -n "`use kde`" ] && inherit kde-functions
inherit eutils
@@ -60,7 +60,7 @@ src_compile() {
emake || die "make failed"
}
-src_install () {
+src_install() {
einstall \
gnomedir=${D}/usr \
kdedir=${D}/${KDEDIR} \
diff --git a/app-sci/chemtool/chemtool-1.6.ebuild b/app-sci/chemtool/chemtool-1.6.ebuild
index 76326491ed9d..b3d70021e487 100644
--- a/app-sci/chemtool/chemtool-1.6.ebuild
+++ b/app-sci/chemtool/chemtool-1.6.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/chemtool/chemtool-1.6.ebuild,v 1.1 2003/07/17 13:09:19 phosphan Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/chemtool/chemtool-1.6.ebuild,v 1.2 2003/08/05 18:31:42 vapier Exp $
[ -n "`use kde`" ] && inherit kde-functions
inherit eutils
@@ -25,7 +25,7 @@ DEPEND=">=media-gfx/transfig-3.2.3d
src_unpack() {
unpack ${A}
cd ${S}
- patch -p0 < ${FILESDIR}/${P}.patch || die "patch failed"
+ epatch ${FILESDIR}/${P}.patch
}
src_compile() {
@@ -58,7 +58,7 @@ src_compile() {
emake || die "make failed"
}
-src_install () {
+src_install() {
dodir ${KDEDIR}/share/applnk/Graphics
dodir ${KDEDIR}/share/mimelnk/application
dodir ${KDEDIR}/share/icons/hicolor/32x32/mimetypes
diff --git a/app-sci/euler/euler-1.59.1.ebuild b/app-sci/euler/euler-1.59.1.ebuild
index 0a608213412e..570b35797dc6 100644
--- a/app-sci/euler/euler-1.59.1.ebuild
+++ b/app-sci/euler/euler-1.59.1.ebuild
@@ -1,15 +1,11 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/euler/euler-1.59.1.ebuild,v 1.10 2003/02/13 09:21:23 vapier Exp $
-
-S=${WORKDIR}/${P}
+# $Header: /var/cvsroot/gentoo-x86/app-sci/euler/euler-1.59.1.ebuild,v 1.11 2003/08/05 18:32:27 vapier Exp $
DESCRIPTION="Mathematical programming environment"
-
+HOMEPAGE="http://euler.sourceforge.net/"
SRC_URI="mirror://sourceforge/euler/euler-1.59.1.tar.gz"
-HOMEPAGE="http://euler.sf.net"
-
LICENSE="GPL-2"
SLOT="0"
KEYWORDS="x86"
@@ -17,7 +13,6 @@ KEYWORDS="x86"
DEPEND="virtual/glibc
virtual/x11
=x11-libs/gtk+-1.2*"
-
PROVIDE="app-misc/euler"
src_unpack() {
@@ -32,13 +27,11 @@ src_unpack() {
}
src_compile() {
-
cd ${S}/source
emake INSTALL_DIR=/usr || die
}
-src_install () {
-
+src_install() {
cd ${S}/source
dodir usr usr/share usr/bin
make INSTALL_DIR=${D}/usr install || die
diff --git a/app-sci/euler/euler-1.60.6.ebuild b/app-sci/euler/euler-1.60.6.ebuild
index 98c8d3282c9b..7b0888799681 100644
--- a/app-sci/euler/euler-1.60.6.ebuild
+++ b/app-sci/euler/euler-1.60.6.ebuild
@@ -1,16 +1,14 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/euler/euler-1.60.6.ebuild,v 1.4 2003/02/13 09:21:27 vapier Exp $
-
-IUSE=""
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/euler/euler-1.60.6.ebuild,v 1.5 2003/08/05 18:32:27 vapier Exp $
#euler only uses two major numners internally, need to do some mangling
MajVer="$(echo ${PV}|cut -d '.' -f 1,2)"
S=${WORKDIR}/${PN}-${MajVer}
DESCRIPTION="Mathematical programming environment"
+HOMEPAGE="http://euler.sourceforge.net/"
SRC_URI="mirror://sourceforge/euler/${P}.tar.gz"
-HOMEPAGE="http://euler.sf.net"
LICENSE="GPL-2"
SLOT="0"
@@ -35,7 +33,7 @@ src_compile() {
emake INSTALL_DIR=/usr || die
}
-src_install () {
+src_install() {
cd ${S}/source
dodir usr usr/share usr/bin
make INSTALL_DIR=${D}/usr install || die
@@ -46,4 +44,3 @@ src_install () {
rm -rf ${D}/usr/share/doc/${PN}
dodoc ChangeLog README TODO
}
-
diff --git a/app-sci/ghemical/ghemical-0.90.ebuild b/app-sci/ghemical/ghemical-0.90.ebuild
index 5099c66d27dd..0c7c6bdf3f98 100644
--- a/app-sci/ghemical/ghemical-0.90.ebuild
+++ b/app-sci/ghemical/ghemical-0.90.ebuild
@@ -1,24 +1,24 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/ghemical/ghemical-0.90.ebuild,v 1.5 2003/02/13 09:21:36 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/ghemical/ghemical-0.90.ebuild,v 1.6 2003/08/05 18:33:25 vapier Exp $
-DEPEND="gnome-base/gnome-libs
- dev-libs/libf2c
- x11-libs/gtkglext
- app-sci/mpqc"
-
-IUSE=""
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="x86"
+inherit eutils
DESCRIPTION="Ghemical supports both quantum-mechanics (semi-empirical and ab initio) models and molecular mechanics models (there is an experimental Tripos 5.2-like force field for organic molecules). Also a tool for reduced protein models is included. Geometry optimization, molecular dynamics and a large set of visualization tools are currently available."
-
HOMEPAGE="http://www.uku.fi/~thassine/ghemical/"
SRC_URI="http://www.uku.fi/~thassine/ghemical/download/${P}.tgz"
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86"
+
+DEPEND="gnome-base/gnome-libs
+ dev-libs/libf2c
+ x11-libs/gtkglext
+ app-sci/mpqc"
+
src_compile() {
- patch -p0 < ${FILESDIR}/${P}-gentoo.patch
+ epatch ${FILESDIR}/${P}-gentoo.patch
./configure --prefix=/usr --enable-mpqc
emake
}
diff --git a/app-sci/ghemical/ghemical-1.00.ebuild b/app-sci/ghemical/ghemical-1.00.ebuild
index 99f1ec75127d..bb596a4c4050 100644
--- a/app-sci/ghemical/ghemical-1.00.ebuild
+++ b/app-sci/ghemical/ghemical-1.00.ebuild
@@ -1,6 +1,14 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/ghemical/ghemical-1.00.ebuild,v 1.8 2003/02/13 09:21:40 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/ghemical/ghemical-1.00.ebuild,v 1.9 2003/08/05 18:33:25 vapier Exp $
+
+DESCRIPTION="Ghemical supports both quantum-mechanics (semi-empirical and ab initio) models and molecular mechanics models (there is an experimental Tripos 5.2-like force field for organic molecules). Also a tool for reduced protein models is included. Geometry optimization, molecular dynamics and a large set of visualization tools are currently available."
+HOMEPAGE="http://www.uku.fi/~thassine/ghemical/"
+SRC_URI="http://www.uku.fi/~thassine/ghemical/download/${P}.tgz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86"
DEPEND="gnome-base/gnome-libs
dev-libs/libf2c
@@ -10,16 +18,6 @@ DEPEND="gnome-base/gnome-libs
dev-libs/libxml
=gnome-base/libglade-0*"
-IUSE=""
-SLOT="0"
-LICENSE="GPL-2"
-KEYWORDS="x86"
-
-DESCRIPTION="Ghemical supports both quantum-mechanics (semi-empirical and ab initio) models and molecular mechanics models (there is an experimental Tripos 5.2-like force field for organic molecules). Also a tool for reduced protein models is included. Geometry optimization, molecular dynamics and a large set of visualization tools are currently available."
-
-HOMEPAGE="http://www.uku.fi/~thassine/ghemical/"
-SRC_URI="http://www.uku.fi/~thassine/ghemical/download/${P}.tgz"
-
src_compile() {
./configure --prefix=/usr --enable-mpqc ||die
emake ||die
diff --git a/app-sci/kconvert/kconvert-1.1.ebuild b/app-sci/kconvert/kconvert-1.1.ebuild
index 54aabf0ab34c..6b9e194ff713 100644
--- a/app-sci/kconvert/kconvert-1.1.ebuild
+++ b/app-sci/kconvert/kconvert-1.1.ebuild
@@ -1,26 +1,26 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/kconvert/kconvert-1.1.ebuild,v 1.1 2003/02/17 20:34:37 mholzer Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/kconvert/kconvert-1.1.ebuild,v 1.2 2003/08/05 18:41:57 vapier Exp $
-# This ebuild was generated by Ebuilder v0.4.
-
-S="${WORKDIR}/${PN}"
DESCRIPTION="Converting Toolbetween Metric and Imperial"
-SRC_URI="http://ftp.kde.com/Math_Science/KConvert/${P}.tar.gz"
HOMEPAGE="http://apps.kde.com/na/2/counter/vid/5632/kcurl"
+SRC_URI="http://ftp.kde.com/Math_Science/KConvert/${P}.tar.gz"
+
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86"
+
DEPEND=""
RDEPEND="virtual/glibc"
-KEYWORDS="x86"
-SLOT="0"
+
+S=${WORKDIR}/${PN}
src_compile() {
econf || die
emake || die
}
-src_install () {
+src_install() {
make DESTDIR=${D} install || die
dodoc AUTHORS ChangeLog COPYING INSTALL README TODO
}
-
diff --git a/app-sci/kmatplot/kmatplot-0.4-r1.ebuild b/app-sci/kmatplot/kmatplot-0.4-r1.ebuild
index 704b31e3bf27..2ac3bfff1882 100644
--- a/app-sci/kmatplot/kmatplot-0.4-r1.ebuild
+++ b/app-sci/kmatplot/kmatplot-0.4-r1.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/kmatplot/kmatplot-0.4-r1.ebuild,v 1.3 2003/02/15 07:10:05 gerk Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/kmatplot/kmatplot-0.4-r1.ebuild,v 1.4 2003/08/05 18:34:16 vapier Exp $
PATCHES="${FILESDIR}/${P}-gentoo.patch
${FILESDIR}/${P}-inline.patch
@@ -10,9 +10,9 @@ PATCHES="${FILESDIR}/${P}-gentoo.patch
inherit kde-base
need-kde 3
-DESCRIPTION="KMatplot is a gnuplot-like tool for plotting data sets in either two or three dimensions."
-LICENSE="GPL-2"
+DESCRIPTION="gnuplot-like tool for plotting data sets in either two or three dimensions"
HOMEPAGE="http://kmatplot.sourceforge.net/"
SRC_URI="http://kmatplot.sourceforge.net/${P}.tar.gz"
-IUSE=""
+
+LICENSE="GPL-2"
KEYWORDS="x86 ~ppc"
diff --git a/app-sci/kmatplot/kmatplot-0.4.ebuild b/app-sci/kmatplot/kmatplot-0.4.ebuild
index 07f430806b95..75cf29ebeffc 100644
--- a/app-sci/kmatplot/kmatplot-0.4.ebuild
+++ b/app-sci/kmatplot/kmatplot-0.4.ebuild
@@ -1,6 +1,6 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/kmatplot/kmatplot-0.4.ebuild,v 1.6 2003/02/15 07:10:05 gerk Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/kmatplot/kmatplot-0.4.ebuild,v 1.7 2003/08/05 18:34:16 vapier Exp $
PATCHES="${FILESDIR}/${P}-gentoo.patch
${FILESDIR}/${P}-inline.patch
@@ -9,9 +9,9 @@ PATCHES="${FILESDIR}/${P}-gentoo.patch
inherit kde-base
need-kde 3
-DESCRIPTION="KMatplot is a gnuplot-like tool for plotting data sets in either two or three dimensions."
-LICENSE="GPL-2"
+DESCRIPTION="gnuplot-like tool for plotting data sets in either two or three dimensions"
HOMEPAGE="http://kmatplot.sourceforge.net/"
SRC_URI="http://kmatplot.sourceforge.net/${P}.tar.gz"
-IUSE=""
+
+LICENSE="GPL-2"
KEYWORDS="x86 ~ppc"
diff --git a/app-sci/lapack/lapack-3.0.ebuild b/app-sci/lapack/lapack-3.0.ebuild
index df1d5d9a6c43..b8ccef718e4c 100644
--- a/app-sci/lapack/lapack-3.0.ebuild
+++ b/app-sci/lapack/lapack-3.0.ebuild
@@ -1,26 +1,26 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/lapack/lapack-3.0.ebuild,v 1.3 2003/02/13 09:23:06 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/lapack/lapack-3.0.ebuild,v 1.4 2003/08/05 18:34:50 vapier Exp $
-S=${WORKDIR}/LAPACK
+DESCRIPTION="Linear Algebra PACKage for scientists, engineers, and mathematicians. This contains the libraries for creating programs that use LAPACK."
+HOMEPAGE="http://www.netlib.org/lapack/"
+SRC_URI="http://www.netlib.org/lapack/lapack.tgz"
LICENSE="lapack"
SLOT="0"
KEYWORDS="x86"
-IUSE=""
-DESCRIPTION="Linear Algebra PACKage for scientists, engineers, and mathematicians. This contains the libraries for creating programs that use LAPACK."
-SRC_URI="http://www.netlib.org/lapack/lapack.tgz"
-HOMEPAGE="http://www.netlib.org/lapack/"
DEPEND="virtual/glibc
app-sci/blas"
+S=${WORKDIR}/LAPACK
+
src_compile() {
cp ${FILESDIR}/Makefile SRC/Makefile
cd SRC
FC="g77" FFLAGS="${CFLAGS}" make static
}
-src_install () {
+src_install() {
dolib.a SRC/liblapack.a
}
diff --git a/app-sci/mpqc/mpqc-2.1.2.ebuild b/app-sci/mpqc/mpqc-2.1.2.ebuild
index 50fd288748ea..f75dcbd19d42 100644
--- a/app-sci/mpqc/mpqc-2.1.2.ebuild
+++ b/app-sci/mpqc/mpqc-2.1.2.ebuild
@@ -1,13 +1,14 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/mpqc/mpqc-2.1.2.ebuild,v 1.5 2003/03/11 21:11:45 seemant Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/mpqc/mpqc-2.1.2.ebuild,v 1.6 2003/08/05 18:35:17 vapier Exp $
-SLOT="0"
+DESCRIPTION="The Massively Parallel Quantum Chemistry Program"
HOMEPAGE="http://aros.ca.sandia.gov/~cljanss/mpqc/"
SRC_URI="http://aros.ca.sandia.gov/~cljanss/mpqc/distrib/${P}.tar.gz
doc? ( http://aros.ca.sandia.gov/~cljanss/mpqc/distrib/${PN}-man-${PV}.tar.gz )"
-DESCRIPTION="The Massively Parallel Quantum Chemistry Program"
+
LICENSE="GPL-2"
+SLOT="0"
KEYWORDS="x86"
IUSE="doc X"
@@ -15,7 +16,7 @@ DEPEND="sys-devel/flex
app-sci/blas
app-sci/lapack
dev-lang/perl
- X? ( x11-base/xfree )"
+ X? ( x11-base/xfree )"
src_compile() {
CFLAGS_SAVE=${CFLAGS}; CXXFLAGS_SAVE=${CXXFLAGS}
diff --git a/app-sci/predict/predict-2.2.1.ebuild b/app-sci/predict/predict-2.2.1.ebuild
index cdafeec1dfa7..29df8d2ce72e 100644
--- a/app-sci/predict/predict-2.2.1.ebuild
+++ b/app-sci/predict/predict-2.2.1.ebuild
@@ -1,19 +1,18 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/predict/predict-2.2.1.ebuild,v 1.6 2003/07/02 12:33:39 aliz Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/predict/predict-2.2.1.ebuild,v 1.7 2003/08/05 18:35:59 vapier Exp $
-HOMEPAGE="http://www.qsl.net/kd2bd/predict.html"
DESCRIPTION="Satellite tracking and orbital prediction."
+HOMEPAGE="http://www.qsl.net/kd2bd/predict.html"
SRC_URI="http://www.amsat.org/amsat/ftp/software/Linux/${P}.tar.gz"
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
KEYWORDS="x86 ~ppc"
DEPEND="sys-libs/ncurses
gtk? ( =x11-libs/gtk+-1.2* )
xforms? ( x11-libs/xforms )"
-
RDEPEND="gtk? ( =x11-libs/gtk+-1.2* )
xforms? ( x11-libs/xforms )"
diff --git a/app-sci/raster3d/raster3d-2.6e.ebuild b/app-sci/raster3d/raster3d-2.6e.ebuild
index e7cd42d23123..9f2e5fc31106 100644
--- a/app-sci/raster3d/raster3d-2.6e.ebuild
+++ b/app-sci/raster3d/raster3d-2.6e.ebuild
@@ -1,24 +1,20 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/raster3d/raster3d-2.6e.ebuild,v 1.3 2003/02/13 09:25:23 vapier Exp $
-
-IUSE=""
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/raster3d/raster3d-2.6e.ebuild,v 1.4 2003/08/05 18:36:39 vapier Exp $
Name="Raster3D"
S="${WORKDIR}/${Name}_${PV}"
-SRC_URI="http://www.bmsc.washington.edu/${PN}/${Name}_${PV}.tar.gz"
-HOMEPAGE="http://www.bmsc.washington.edu/raster3d/raster3d.html"
DESCRIPTION="a set of tools for generating high quality raster images of proteins or other molecules"
+HOMEPAGE="http://www.bmsc.washington.edu/raster3d/raster3d.html"
+SRC_URI="http://www.bmsc.washington.edu/${PN}/${Name}_${PV}.tar.gz"
-DEPEND="virtual/x11"
-
-SLOT="0"
LICENSE="as-is"
+SLOT="0"
KEYWORDS="x86"
-src_compile() {
+DEPEND="virtual/x11"
- cd ${S}
+src_compile() {
sed "/prefix/s/\/usr\/local/\/usr/" ${S}/Makefile.template > ${S}/Makefile.template.new
mv ${S}/Makefile.template.new ${S}/Makefile.template
@@ -27,7 +23,6 @@ src_compile() {
}
src_install() {
-
dodir /usr/bin
dodir /usr/share/Raster3D/materials
dodir /usr/share/Raster3D/html
@@ -47,4 +42,3 @@ src_install() {
echo -e "R3D_LIB=/usr/share/Raster3D/materials" > \
${D}/etc/env.d/10raster3d
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild b/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild
index 98b757f4e8ca..63c1e4c92e2e 100644
--- a/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild
@@ -1,25 +1,23 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild,v 1.6 2003/02/13 09:26:55 vapier Exp $
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.4.2.ebuild,v 1.7 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/xdrawchem/xdrawchem-${PV}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/xdrawchem/"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/xdrawchem/xdrawchem-${PV}.tgz"
-KEYWORDS="x86"
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.0.0 )"
+DEPEND="qt? ( >=x11-libs/qt-3.0.0 )"
src_compile() {
emake INSTRING=/usr/share/${P} || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem
@@ -29,4 +27,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.5.ebuild b/app-sci/xdrawchem/xdrawchem-1.5.ebuild
index 5373d0ce4571..d4a62ddafb45 100644
--- a/app-sci/xdrawchem/xdrawchem-1.5.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.5.ebuild
@@ -1,20 +1,17 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.5.ebuild,v 1.5 2003/02/13 09:27:00 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.5.ebuild,v 1.6 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86 ~ppc ~sparc"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.0.0 )"
-
+DEPEND="qt? ( >=x11-libs/qt-3.0.0 )"
#the app requires babel at run time to be able to perform various file type conversions
RDEPEND="${DEPEND}
app-sci/babel"
@@ -23,7 +20,7 @@ src_compile() {
emake -f Makefile.orig INSTRING=/usr/share/${P} || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem
@@ -33,4 +30,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild b/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild
index 4236316803fa..23e5ac9d1a81 100644
--- a/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild
@@ -1,26 +1,24 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild,v 1.3 2003/02/13 09:27:07 vapier Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.3.ebuild,v 1.4 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86 ~ppc ~sparc"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.1.0 )"
+DEPEND="qt? ( >=x11-libs/qt-3.1.0 )"
src_compile() {
./configure --prefix=/usr || die
emake -f Makefile INSTRING=/usr/share/xdrawchem || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem/xdrawchem
@@ -30,4 +28,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild b/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild
index ec51c1ef77b7..265d486a0158 100644
--- a/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild
@@ -1,26 +1,24 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild,v 1.2 2003/07/02 12:33:39 aliz Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.8.ebuild,v 1.3 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86 ~ppc ~sparc"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.1.0 )"
+DEPEND="qt? ( >=x11-libs/qt-3.1.0 )"
src_compile() {
./configure --prefix=/usr || die
emake -f Makefile INSTRING=/usr/share/xdrawchem || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem/xdrawchem
@@ -31,4 +29,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
dohtml doc/*
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.6.ebuild b/app-sci/xdrawchem/xdrawchem-1.6.ebuild
index d85d31ec6cf3..17985c5a28ad 100644
--- a/app-sci/xdrawchem/xdrawchem-1.6.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.6.ebuild
@@ -1,20 +1,17 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.ebuild,v 1.5 2003/07/02 12:33:39 aliz Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.6.ebuild,v 1.6 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86 ~ppc ~sparc"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.0.0 )"
-
+DEPEND="qt? ( >=x11-libs/qt-3.0.0 )"
#if you would like to use app-sci/babel instead of included openbabel, please uncomment the following 2 lines
#RDEPEND="${DEPEND}
# app-sci/babel"
@@ -24,7 +21,7 @@ src_compile() {
emake -f Makefile INSTRING=/usr/share/xdrawchem || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem/xdrawchem
diff --git a/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild b/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild
index 923beafb4ba7..b2b7c14ed361 100644
--- a/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild
@@ -1,26 +1,24 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild,v 1.2 2003/06/24 09:45:57 phosphan Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.7.1.ebuild,v 1.3 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="x86 ~ppc ~sparc "
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.1.0 )"
+DEPEND="qt? ( >=x11-libs/qt-3.1.0 )"
src_compile() {
./configure --prefix=/usr || die
emake -f Makefile INSTRING=/usr/share/xdrawchem || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem/xdrawchem
@@ -31,4 +29,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
dohtml doc/*
}
-
diff --git a/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild b/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild
index ef273c13deea..c95e85f411c2 100644
--- a/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild
+++ b/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild
@@ -1,19 +1,17 @@
# Copyright 1999-2003 Gentoo Technologies, Inc.
-# Distributed under the terms of the GNU General Public License, v2 or later
-# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild,v 1.1 2003/07/16 09:55:23 robh Exp $
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/app-sci/xdrawchem/xdrawchem-1.7.3.ebuild,v 1.2 2003/08/05 18:41:03 vapier Exp $
-IUSE="qt"
-
-S=${WORKDIR}/${P}
-DESCRIPTION="XDrawChem--a molecular structure drawing program."
-SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
+DESCRIPTION="a molecular structure drawing program"
HOMEPAGE="http://www.prism.gatech.edu/~gte067k/${PN}"
+SRC_URI="http://www.prism.gatech.edu/~gte067k/${PN}/${P}.tgz"
-KEYWORDS="~x86 ~ppc ~sparc "
-SLOT="0"
LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~x86 ~ppc ~sparc"
+IUSE="qt"
-DEPEND="qt? ( >=qt-3.1.0 )"
+DEPEND="qt? ( >=x11-libs/qt-3.1.0 )"
src_compile() {
./configure --prefix=/usr || die
@@ -22,7 +20,7 @@ src_compile() {
emake -f Makefile INSTRING=/usr/share/xdrawchem || die
}
-src_install () {
+src_install() {
dodir /usr/bin
dobin xdrawchem/xdrawchem
@@ -33,4 +31,3 @@ src_install () {
dodoc README.txt TODO.txt COPYRIGHT.txt HISTORY.txt
dohtml doc/*
}
-