Removed gzipped lop patch, re-submitting as plain text and updated ebuild with patch name

Package-Manager: portage-2.0.51.22-r2

5 files changed, 29 insertions, 6 deletions

diff --git a/sci-biology/ncbi-tools/ChangeLog b/sci-biology/ncbi-tools/ChangeLog
index 2a478e5b18a7..c648fe67cc8e 100644
--- a/sci-biology/ncbi-tools/ChangeLog
+++ b/sci-biology/ncbi-tools/ChangeLog
@@ -1,6 +1,14 @@
 # ChangeLog for sci-biology/ncbi-tools
 # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.19 2005/08/08 23:39:13 ranger Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ChangeLog,v 1.20 2005/08/09 15:52:26 ranger Exp $
+
+  09 Aug 2005; Brent Baude <ranger@gentoo.org>
+  +files/ncbi-tools-20050605-lop.patch,
+  -files/ncbi-tools-20050605-lop.patch.gz, ncbi-tools-20050605.ebuild:
+  For the ebuild ncbi-tools-20050605, I was asked to remove the gz patch and
+  submit it as plain text. This commit will remove the gz patch and replace it
+  with a plain text one. The patch name change is also reflected in the
+  ebuild.
 
   08 Aug 2005; Brent Baude <ranger@gentoo.org>
   +files/ncbi-tools-20050605-lop.patch.gz, ncbi-tools-20050605.ebuild:
diff --git a/sci-biology/ncbi-tools/Manifest b/sci-biology/ncbi-tools/Manifest
index 8163e2dfa539..498cb46fa04d 100644
--- a/sci-biology/ncbi-tools/Manifest
+++ b/sci-biology/ncbi-tools/Manifest
@@ -1,12 +1,12 @@
-MD5 173b54d8fcaa23ee159384b4a9a706ba ChangeLog 6509
+MD5 e387e6994fb808872b95bcddfa01f43d ChangeLog 6906
 MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
 MD5 6c8b57dc3b8c8523ae2adb7a1a8f1ed3 ncbi-tools-20041020-r1.ebuild 5630
 MD5 1bcb9734e24ba30ff06c0aa3eed9076d ncbi-tools-20050429.ebuild 5627
-MD5 b5be5910dff73e5b599890fe334c35d5 ncbi-tools-20050605.ebuild 5698
+MD5 f17b8111c47dedf18327e539a1bae8d9 ncbi-tools-20050605.ebuild 5695
 MD5 a5f54430f6f7422d75320e91068cae0b files/21ncbi-r1 232
 MD5 756db6700c84d3b303bfc3d0a28871de files/21ncbi 166
 MD5 9cef4ca17113d005c44d3bf3d330f747 files/digest-ncbi-tools-20050605 144
 MD5 6fa8c1b5254e9c217c399c949bc75f45 files/digest-ncbi-tools-20041020-r1 144
 MD5 ae77b2436a5f4dfcb6f71f2149782dc7 files/digest-ncbi-tools-20050429 144
 MD5 23986a001c85eb8c2c319aacfa9cb40c files/ncbirc 33
-MD5 c7bf6b862417dcdfa07c60cd783392d7 files/ncbi-tools-20050605-lop.patch.gz 398
+MD5 6b62beda180ee6d7d4d4a52507acc3ff files/ncbi-tools-20050605-lop.patch 701
diff --git a/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch b/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch
new file mode 100644
index 000000000000..867b203aecb1
--- /dev/null
+++ b/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch
@@ -0,0 +1,15 @@
+--- platform/linux-power.ncbi.mk.bak	2005-08-04 22:45:13.000000000 -0500
++++ platform/linux-power.ncbi.mk	2005-08-04 22:45:35.000000000 -0500
+@@ -9,10 +9,10 @@
+ #it appears the flags above do not work anymore with newer libc,
+ #the new flags should work. Dima. 08/23/01
+ NCBI_AR=ar
+-NCBI_CC = xlc_r -w -qcpluscmt -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
++NCBI_CC = gcc -D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE
+ NCBI_CFLAGS1 = -c 
+ NCBI_LDFLAGS1 = -O3 -D_LARGE_FILES 
+-NCBI_OPTFLAG = -O3 -qmaxmem=-1 -D_LARGE_FILE
++NCBI_OPTFLAG = -O3  -D_LARGE_FILE
+ NCBI_BIN_MASTER = /vol/stcfs/rchen/LoP/ncbi/bin
+ NCBI_BIN_COPY = /vol/stcfs/rchen/LoP/ncbi/bin
+ NCBI_INCDIR = /vol/stcfs/rchen/LoP/ncbi/include
diff --git a/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz b/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz
deleted file mode 100644
index 24a5b531c8ee..000000000000
--- a/sci-biology/ncbi-tools/files/ncbi-tools-20050605-lop.patch.gz
+++ /dev/null
diff --git a/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild b/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
index d5a9d098809d..1eacf2f2a54a 100644
--- a/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
+++ b/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2005 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild,v 1.2 2005/08/08 23:39:13 ranger Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools/ncbi-tools-20050605.ebuild,v 1.3 2005/08/09 15:52:26 ranger Exp $
 
 inherit flag-o-matic toolchain-funcs eutils
 
@@ -38,7 +38,7 @@ pkg_setup() {
 src_unpack() {
 	unpack ${A}
 
-	use ppc64 && cd ${S} && epatch ${FILESDIR}/${P}-lop.patch.gz
+	use ppc64 && cd ${S} && epatch ${FILESDIR}/${P}-lop.patch
 
 	if ! use X; then
 		cd ${S}/make