diff options
| author |   Justin Lecher <jlec@gentoo.org> | 2013-02-28 07:50:08 +0000 |
|---|---|---|
| committer | Justin Lecher <jlec@gentoo.org> | 2013-02-28 07:50:08 +0000 |
| commit | 63e7adb2bba6efcd330ebf5bb63c97ac8b54126e (patch) | |
| tree | 66e9c2109aab9dfcdc3bf0bb07f59a421481cf17 /sci-biology | |
| parent | netsurf eclass preparation. (diff) | |
| download | gentoo-2-63e7adb2bba6efcd330ebf5bb63c97ac8b54126e.tar.gz gentoo-2-63e7adb2bba6efcd330ebf5bb63c97ac8b54126e.tar.bz2 gentoo-2-63e7adb2bba6efcd330ebf5bb63c97ac8b54126e.zip | |
sci-biology/rebase: Version Bump
(Portage version: 2.2.0_alpha163/cvs/Linux x86_64, signed Manifest commit with key 70EB7916)
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 10 | ||||
| -rw-r--r-- | sci-biology/rebase/metadata.xml | 4 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-1303.ebuild | 46 |
3 files changed, 56 insertions, 4 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index 32f2200f4bf2..33a7616f0221 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/rebase -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.114 2012/03/08 07:15:15 jlec Exp $ +# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.115 2013/02/28 07:50:07 jlec Exp $ + +*rebase-1303 (28 Feb 2013) + + 28 Feb 2013; Justin Lecher <jlec@gentoo.org> +rebase-1303.ebuild, + metadata.xml: + Version Bump 08 Mar 2012; Justin Lecher <jlec@gentoo.org> -rebase-1006.ebuild, -rebase-1105.ebuild: diff --git a/sci-biology/rebase/metadata.xml b/sci-biology/rebase/metadata.xml index 752a98d2dc33..734fcff7e215 100644 --- a/sci-biology/rebase/metadata.xml +++ b/sci-biology/rebase/metadata.xml @@ -1,8 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <longdescription> + <herd>sci-biology</herd> + <longdescription> The Restriction Enzyme data BASE is a collection of information about restriction enzymes and related proteins. It is maintained by New England Biolabs. It contains published and unpublished references, diff --git a/sci-biology/rebase/rebase-1303.ebuild b/sci-biology/rebase/rebase-1303.ebuild new file mode 100644 index 000000000000..87e0294ef32a --- /dev/null +++ b/sci-biology/rebase/rebase-1303.ebuild @@ -0,0 +1,46 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1303.ebuild,v 1.1 2013/02/28 07:50:08 jlec Exp $ + +EAPI=5 + +MY_PV=${PV#1} + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz" + +SLOT="0" +LICENSE="public-domain" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris" +IUSE="emboss minimal" + +RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )" +DEPEND="${RDEPEND}" + +RESTRICT="binchecks strip" + +src_compile() { + if use emboss; then + echo; einfo "Indexing Rebase for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \ + -protofile proto.${MY_PV} -equivalences \ + || die "Indexing Rebase failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins withrefm.${MY_PV} proto.${MY_PV} + fi + newdoc REBASE.DOC README + if use emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/embossre.{enz,ref,sup} + insinto /usr/share/EMBOSS/data + doins REBASE/embossre.equ + fi +} |