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| author |   Olivier Fisette <ribosome@gentoo.org> | 2005-01-02 21:48:57 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2005-01-02 21:48:57 +0000 |
| commit | 69bd262eb785775528d8bf5e0c96d3661764cb4e (patch) | |
| tree | ea1e84b94e7d21c36a034fa956cec8ebb244df8a /sci-biology/rebase | |
| parent | Change encoding to UTF-8 for GLEP 31 compliance (Manifest recommit) (diff) | |
| download | gentoo-2-69bd262eb785775528d8bf5e0c96d3661764cb4e.tar.gz gentoo-2-69bd262eb785775528d8bf5e0c96d3661764cb4e.tar.bz2 gentoo-2-69bd262eb785775528d8bf5e0c96d3661764cb4e.zip | |
New version: 501. Added 412 to x86.
Diffstat (limited to 'sci-biology/rebase')
| -rw-r--r-- | sci-biology/rebase/ChangeLog | 8 | ||||
| -rw-r--r-- | sci-biology/rebase/Manifest | 4 | ||||
| -rw-r--r-- | sci-biology/rebase/files/digest-rebase-501 | 1 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-412.ebuild | 4 | ||||
| -rw-r--r-- | sci-biology/rebase/rebase-501.ebuild | 35 |
5 files changed, 48 insertions, 4 deletions
diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog index ddc38272fe66..ba47b1a2b1ed 100644 --- a/sci-biology/rebase/ChangeLog +++ b/sci-biology/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/rebase # Copyright 2000-2005 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.3 2005/01/02 01:55:00 j4rg0n Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.4 2005/01/02 21:48:57 ribosome Exp $ + +*rebase-501 (02 Jan 2005) + + 02 Jan 2005; Olivier Fisette <ribosome@gentoo.org> rebase-412.ebuild, + +rebase-501.ebuild: + New version: 501. Added 412 to x86. 01 Jan 2005; Lina Pezzella <j4rg0n@gentoo.org> rebase-412.ebuild: Unstable ppc-macos. diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest index 2fe794ef812e..08eaf1b53dbc 100644 --- a/sci-biology/rebase/Manifest +++ b/sci-biology/rebase/Manifest @@ -1,6 +1,8 @@ +MD5 c607ca8b0a9ec16e3b78a4859b8f03da rebase-501.ebuild 1130 MD5 261266bba96211352b28cc691b83b628 rebase-411.ebuild 1118 MD5 73b78055b58c550aee80f88bef1ddca2 ChangeLog 1742 MD5 550f8d428f3e75690b43d32df6aa60cd metadata.xml 900 -MD5 c607ca8b0a9ec16e3b78a4859b8f03da rebase-412.ebuild 1130 +MD5 77d751dc2c87ed7c6f747ad1aaa09cb4 rebase-412.ebuild 1129 MD5 04a9c29643e242bfdb170ef425f2a76e files/digest-rebase-411 63 MD5 c4f5461dd83ed5a1176a07a0786a6af7 files/digest-rebase-412 63 +MD5 ad65c17b06a4725c0048159c32826e03 files/digest-rebase-501 63 diff --git a/sci-biology/rebase/files/digest-rebase-501 b/sci-biology/rebase/files/digest-rebase-501 new file mode 100644 index 000000000000..ada5b318eff5 --- /dev/null +++ b/sci-biology/rebase/files/digest-rebase-501 @@ -0,0 +1 @@ +MD5 bd581befa07ca4d327e5ab094a5a95ad rebase-501.tar.bz2 177929 diff --git a/sci-biology/rebase/rebase-412.ebuild b/sci-biology/rebase/rebase-412.ebuild index 1826b82065f2..a4dda83454fa 100644 --- a/sci-biology/rebase/rebase-412.ebuild +++ b/sci-biology/rebase/rebase-412.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2005 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-412.ebuild,v 1.3 2005/01/02 15:23:10 ribosome Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-412.ebuild,v 1.4 2005/01/02 21:48:57 ribosome Exp $ DESCRIPTION="A restriction enzyme database" HOMEPAGE="http://rebase.neb.com" @@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2" LICENSE="public-domain" SLOT="0" -KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos" +KEYWORDS="x86 ~ppc ~amd64 ~ppc-macos" IUSE="no-emboss no-rawdb" src_compile() { diff --git a/sci-biology/rebase/rebase-501.ebuild b/sci-biology/rebase/rebase-501.ebuild new file mode 100644 index 000000000000..4c2f5bf97a69 --- /dev/null +++ b/sci-biology/rebase/rebase-501.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2005 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-501.ebuild,v 1.1 2005/01/02 21:48:57 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://rebase.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64 ~ppc-macos" +IUSE="no-emboss no-rawdb" + +src_compile() { + # Index the database for use with emboss if emboss is installed and + # the user did not explicitly request not to index the database. + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + fi +} + +src_install() { + if ! use no-rawdb; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} + fi + newdoc REBASE.DOC README + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} + fi +} |