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| author |   Olivier Fisette <ribosome@gentoo.org> | 2009-09-01 18:58:58 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2009-09-01 18:58:58 +0000 |
| commit | fe92747a505ba0c4ed9f10d4dddf34645e3a3f9f (patch) | |
| tree | 3d6e1d03a7a6d089f853ac223960fcf6d0c328f0 /sci-biology/prints | |
| parent | - stable on x86 and amd64 (diff) | |
| download | gentoo-2-fe92747a505ba0c4ed9f10d4dddf34645e3a3f9f.tar.gz gentoo-2-fe92747a505ba0c4ed9f10d4dddf34645e3a3f9f.tar.bz2 gentoo-2-fe92747a505ba0c4ed9f10d4dddf34645e3a3f9f.zip | |
New upsteam version.
(Portage version: 2.2_rc40/cvs/Linux x86_64)
Diffstat (limited to 'sci-biology/prints')
| -rw-r--r-- | sci-biology/prints/ChangeLog | 9 | ||||
| -rw-r--r-- | sci-biology/prints/prints-39.0.ebuild | 44 |
2 files changed, 51 insertions, 2 deletions
diff --git a/sci-biology/prints/ChangeLog b/sci-biology/prints/ChangeLog index de21ec19c24a..99fc1766cb97 100644 --- a/sci-biology/prints/ChangeLog +++ b/sci-biology/prints/ChangeLog @@ -1,6 +1,11 @@ # ChangeLog for sci-biology/prints -# Copyright 2000-2006 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/ChangeLog,v 1.19 2006/11/02 20:21:23 grobian Exp $ +# Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/ChangeLog,v 1.20 2009/09/01 18:58:58 ribosome Exp $ + +*prints-39.0 (01 Sep 2009) + + 01 Sep 2009; Olivier Fisette <ribosome@gentoo.org> +prints-39.0.ebuild: + New upstream version. 02 Nov 2006; Fabian Groffen <grobian@gentoo.org> prints-38.0.ebuild: Dropped ppc-macos, see you in prefix. diff --git a/sci-biology/prints/prints-39.0.ebuild b/sci-biology/prints/prints-39.0.ebuild new file mode 100644 index 000000000000..ff93cb5208d4 --- /dev/null +++ b/sci-biology/prints/prints-39.0.ebuild @@ -0,0 +1,44 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/prints/prints-39.0.ebuild,v 1.1 2009/09/01 18:58:58 ribosome Exp $ + +MY_PV="${PV/./_}" + +DESCRIPTION="A protein motif fingerprint database" +LICENSE="public-domain" +HOMEPAGE="http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/" +SRC_URI="mirror://gentoo/${P}.tar.bz2" + +SLOT="0" +IUSE="emboss minimal" +# Minimal build keeps only the indexed files (if applicable) and the +# documentation. The non-indexed database is not installed. +KEYWORDS="~amd64 ~ppc ~ppc64 ~sparc ~x86" + +DEPEND="emboss? ( sci-biology/emboss )" + +RDEPEND="${DEPEND}" + +src_compile() { + if use emboss; then + mkdir PRINTS + echo + einfo "Indexing PRINTS for usage with EMBOSS." + EMBOSS_DATA="." printsextract -auto -infile prints${MY_PV}.dat || die \ + "Indexing PRINTS failed." + echo + fi +} + +src_install() { + if ! use minimal; then + insinto /usr/share/${PN} + doins newpr.lis ${PN}${MY_PV}.{all.fasta,dat,kdat,lis,nam,vsn} || die \ + "Installing raw database failed." + fi + if use emboss; then + insinto /usr/share/EMBOSS/data/PRINTS + doins PRINTS/* || die "Installing EMBOSS data files failed." + fi + dodoc README || die "Documentation installation failed." +} |