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| author |   Olivier Fisette <ribosome@gentoo.org> | 2004-10-06 12:44:33 +0000 |
|---|---|---|
| committer | Olivier Fisette <ribosome@gentoo.org> | 2004-10-06 12:44:33 +0000 |
| commit | a495a31ae72dfeb2f06720b5c70a47556e1567e6 (patch) | |
| tree | 551a120f34010c65b2f8f5a72d33a83720cfd7e2 /app-sci | |
| parent | Initial import. (Manifest recommit) (diff) | |
| download | gentoo-2-a495a31ae72dfeb2f06720b5c70a47556e1567e6.tar.gz gentoo-2-a495a31ae72dfeb2f06720b5c70a47556e1567e6.tar.bz2 gentoo-2-a495a31ae72dfeb2f06720b5c70a47556e1567e6.zip | |
Initial import.
Diffstat (limited to 'app-sci')
| -rw-r--r-- | app-sci/njplot-unrooted/ChangeLog | 10 | ||||
| -rw-r--r-- | app-sci/njplot-unrooted/Manifest | 3 | ||||
| -rw-r--r-- | app-sci/njplot-unrooted/files/digest-njplot-unrooted-1 | 1 | ||||
| -rw-r--r-- | app-sci/njplot-unrooted/metadata.xml | 16 | ||||
| -rw-r--r-- | app-sci/njplot-unrooted/njplot-unrooted-1.ebuild | 35 |
5 files changed, 65 insertions, 0 deletions
diff --git a/app-sci/njplot-unrooted/ChangeLog b/app-sci/njplot-unrooted/ChangeLog new file mode 100644 index 000000000000..46f8cbe5865e --- /dev/null +++ b/app-sci/njplot-unrooted/ChangeLog @@ -0,0 +1,10 @@ +# ChangeLog for app-sci/njplot-unrooted +# Copyright 1999-2004 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/njplot-unrooted/ChangeLog,v 1.1 2004/10/06 12:44:33 ribosome Exp $ + +*njplot-unrooted-1 (06 Oct 2004) + + 06 Oct 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml, + +njplot-unrooted-1.ebuild: + Initial import. + diff --git a/app-sci/njplot-unrooted/Manifest b/app-sci/njplot-unrooted/Manifest new file mode 100644 index 000000000000..5ecd422c95bf --- /dev/null +++ b/app-sci/njplot-unrooted/Manifest @@ -0,0 +1,3 @@ +MD5 9439f76d3db2de2a1632b04d7d844964 njplot-unrooted-1.ebuild 693 +MD5 a1727bd238aff0cb1debdf9b11b21b5e metadata.xml 609 +MD5 72fe56f3a4074cf7324d469c568a242a files/digest-njplot-unrooted-1 69 diff --git a/app-sci/njplot-unrooted/files/digest-njplot-unrooted-1 b/app-sci/njplot-unrooted/files/digest-njplot-unrooted-1 new file mode 100644 index 000000000000..5d1ded51f641 --- /dev/null +++ b/app-sci/njplot-unrooted/files/digest-njplot-unrooted-1 @@ -0,0 +1 @@ +MD5 bd8228dbc78ab5858154063517d4b6e1 njplot-unrooted-1.tar.bz2 34352 diff --git a/app-sci/njplot-unrooted/metadata.xml b/app-sci/njplot-unrooted/metadata.xml new file mode 100644 index 000000000000..b0cf95961f50 --- /dev/null +++ b/app-sci/njplot-unrooted/metadata.xml @@ -0,0 +1,16 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer> + <email>ribosome@gentoo.org</email> + <name>Olivier Fisette</name> + </maintainer> + <herd>sci</herd> + <longdescription> + NJplot is a tree drawing program able to draw any phylogenetic tree + expressed in the Newick phylogenetic tree format (e.g., the format used + by the PHYLIP package). NJplot is especially convenient for rooting the + unrooted trees obtained from parsimony, distance or maximum likelihood + tree-building methods. + </longdescription> +</pkgmetadata> diff --git a/app-sci/njplot-unrooted/njplot-unrooted-1.ebuild b/app-sci/njplot-unrooted/njplot-unrooted-1.ebuild new file mode 100644 index 000000000000..7a03e56af70d --- /dev/null +++ b/app-sci/njplot-unrooted/njplot-unrooted-1.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2004 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/njplot-unrooted/njplot-unrooted-1.ebuild,v 1.1 2004/10/06 12:44:33 ribosome Exp $ + +DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting" +HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86" +IUSE="" + +DEPEND="app-sci/ncbi-tools + virtual/x11" + +src_unpack() { + unpack ${A} + cd ${S} + sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c +} + +src_compile() { + make -e || die +} + +src_install() { + dobin newicktops njplot unrooted + + insinto /usr/share/doc/${PF} + doins njplot.help + + insinto /usr/share/${PN} + doins test.ph +} |