sci-biology/biopandas/biopandas-0.2.7.ebuild


1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40

# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2

EAPI=7

PYTHON_COMPAT=( python3_{6..9} )

inherit distutils-r1

MY_PN="BioPandas"
MY_P="${MY_PN}-${PV}"

DESCRIPTION="Molecular Structures in Pandas DataFrames"
HOMEPAGE="
	https://rasbt.github.io/biopandas/
	https://github.com/rasbt/biopandas
	https://pypi.org/project/BioPandas/"
SRC_URI="mirror://pypi/${MY_P:0:1}/${MY_PN}/${P}.tar.gz"

LICENSE="BSD"
SLOT="0"
KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
IUSE="test"
RESTRICT="!test? ( test )"

RDEPEND="
	dev-python/numpy[${PYTHON_USEDEP}]
	dev-python/pandas[${PYTHON_USEDEP}]
	sci-libs/scipy[${PYTHON_USEDEP}]"

distutils_enable_tests nose

python_test() {
	"${EPYTHON}" --version || die
	"${EPYTHON}" -c "import numpy; print('numpy %s' % numpy.__version__)" || die
	"${EPYTHON}" -c "import scipy; print('scipy %s' % scipy.__version__)" || die
	"${EPYTHON}" -c "import pandas; print('pandas %s' % pandas.__version__)" || die

	nosetests -s --verbose ${PN} || die
}