From 465ad2177c6573574db5d9514684adb90208fd6e Mon Sep 17 00:00:00 2001
From: Jakov Smolic <jakov.smolic@sartura.hr>
Date: Tue, 4 May 2021 22:56:00 +0100
Subject: sci-biology/diya: Remove last-rited pkg

Closes: https://bugs.gentoo.org/625492
Signed-off-by: Jakov Smolic <jakov.smolic@sartura.hr>
Signed-off-by: Sam James <sam@gentoo.org>
---
 sci-biology/diya/Manifest            |  1 -
 sci-biology/diya/diya-1.0_rc4.ebuild | 42 ------------------------------------
 sci-biology/diya/metadata.xml        | 11 ----------
 3 files changed, 54 deletions(-)
 delete mode 100644 sci-biology/diya/Manifest
 delete mode 100644 sci-biology/diya/diya-1.0_rc4.ebuild
 delete mode 100644 sci-biology/diya/metadata.xml

(limited to 'sci-biology')

diff --git a/sci-biology/diya/Manifest b/sci-biology/diya/Manifest
deleted file mode 100644
index 7a98449a5c8d..000000000000
--- a/sci-biology/diya/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST diya-1.0-rc4.tar.gz 386706 BLAKE2B 9d000892c3da9ec307a8e089056611bc9cd566ac2dea046601506215c1a5c5fb67621324d2d9e1de94ee4e00129325448e3a1a8aa417e5d8c07f564a77e287d6 SHA512 64a00cb7f07200882d0b97f58e6b7f26d08ab0eab43834c3d19ab08f61080f8edb4a63833095e876c72c087324d39b2c4334ed1d3aa0280b7efb6a7ab3e08007
diff --git a/sci-biology/diya/diya-1.0_rc4.ebuild b/sci-biology/diya/diya-1.0_rc4.ebuild
deleted file mode 100644
index ae923b60da8d..000000000000
--- a/sci-biology/diya/diya-1.0_rc4.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI="5"
-
-inherit perl-module
-
-DESCRIPTION="Do It Yourself Annotation, tools & libraries for sequence assembly & annotation"
-HOMEPAGE="http://gmod.org/wiki/Diya"
-SRC_URI="mirror://sourceforge/diyg/files/diya/diya-1.0/diya-${PV/_/-}.tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE="-minimal"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND="sci-biology/bioperl
-	dev-perl/Data-Utilities
-	dev-perl/XML-Simple"
-RDEPEND="${DEPEND}
-	!minimal? (
-		sci-biology/mummer
-		sci-biology/glimmer
-		sci-biology/trnascan-se
-		sci-biology/infernal )"
-
-# see ftp://ftp.ncbi.nih.gov/blast/ to check if blast and blast+ are different from ncbi-tools and ncbi-tools++
-# * rfamscan.pl v0.1      (http://www.sanger.ac.uk/Users/sgj/code/)
-# * UniRef50                              (http://www.ebi.ac.uk/uniref/)
-# * Protein Clusters (ftp://ftp.ncbi.nih.gov/genomes/Bacteria/CLUSTERS/)
-# The file cddid_all.tbl can be found at ftp://ftp.ncbi.nih.gov/pub/mmdb/cdd/.
-
-S="${WORKDIR}/diya-${PV/_/-}"
-
-SRC_TEST=do
-
-src_install() {
-	mydoc="INSTALL README docs/diya.html"
-	perl-module_src_install
-	insinto /usr/share/${PN}
-	doins -r diya.conf docs examples scripts
-}
diff --git a/sci-biology/diya/metadata.xml b/sci-biology/diya/metadata.xml
deleted file mode 100644
index 37bde911b940..000000000000
--- a/sci-biology/diya/metadata.xml
+++ /dev/null
@@ -1,11 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-  <maintainer type="project">
-    <email>sci-biology@gentoo.org</email>
-    <name>Gentoo Biology Project</name>
-  </maintainer>
-  <upstream>
-    <remote-id type="sourceforge">diyg</remote-id>
-  </upstream>
-</pkgmetadata>
-- 
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