From 9ea369b8c83758188ab589309301f7d55c7ebe53 Mon Sep 17 00:00:00 2001
From: Andrey Kislyuk <weaver@gentoo.org>
Date: Thu, 29 Oct 2009 02:24:55 +0000
Subject: Version bump (Portage version: 2.2_rc30/cvs/Linux x86_64)

---
 sci-biology/bwa/ChangeLog        |  7 ++++++-
 sci-biology/bwa/bwa-0.5.0.ebuild | 29 +++++++++++++++++++++++++++++
 2 files changed, 35 insertions(+), 1 deletion(-)
 create mode 100644 sci-biology/bwa/bwa-0.5.0.ebuild

(limited to 'sci-biology')

diff --git a/sci-biology/bwa/ChangeLog b/sci-biology/bwa/ChangeLog
index 5ebc06f32e6f..32b61b43c3b3 100644
--- a/sci-biology/bwa/ChangeLog
+++ b/sci-biology/bwa/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/bwa
 # Copyright 1999-2009 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.4 2009/06/12 00:52:47 fauli Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/ChangeLog,v 1.5 2009/10/29 02:24:55 weaver Exp $
+
+*bwa-0.5.0 (28 Oct 2009)
+
+  28 Oct 2009; Andrey Kislyuk <weaver@gentoo.org> +bwa-0.5.0.ebuild:
+  Version bump
 
   12 Jun 2009; Christian Faulhammer <fauli@gentoo.org> bwa-0.4.6.ebuild:
   respect CFLAGS, thus removing the hard 64bit build and other niceties
diff --git a/sci-biology/bwa/bwa-0.5.0.ebuild b/sci-biology/bwa/bwa-0.5.0.ebuild
new file mode 100644
index 000000000000..4cda1f4b3a80
--- /dev/null
+++ b/sci-biology/bwa/bwa-0.5.0.ebuild
@@ -0,0 +1,29 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bwa/bwa-0.5.0.ebuild,v 1.1 2009/10/29 02:24:55 weaver Exp $
+
+EAPI=2
+
+DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner"
+HOMEPAGE="http://maq.sourceforge.net/"
+SRC_URI="mirror://sourceforge/maq/${P}.tar.bz2"
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND=""
+RDEPEND=""
+
+src_prepare() {
+	sed -e "/^CFLAGS.*/d" -i "${S}"/Makefile
+}
+
+src_install() {
+	dobin bwa || die
+	doman bwa.1 || die
+	exeinto /usr/share/${PN}
+	doexe solid2fastq.pl || die
+	dodoc ChangeLog NEWS
+}
-- 
cgit v1.2.3-65-gdbad