diff options
Diffstat (limited to 'sci-biology/poa/files')
| -rw-r--r-- | sci-biology/poa/files/2-respect-flags.patch | 26 |
1 files changed, 26 insertions, 0 deletions
diff --git a/sci-biology/poa/files/2-respect-flags.patch b/sci-biology/poa/files/2-respect-flags.patch new file mode 100644 index 000000000000..bdd638cf64b7 --- /dev/null +++ b/sci-biology/poa/files/2-respect-flags.patch @@ -0,0 +1,26 @@ +diff --git a/Makefile b/Makefile +index a65bed0..713a7ab 100644 +--- a/Makefile ++++ b/Makefile +@@ -26,9 +26,10 @@ LIBOBJECTS= \ + stringptr.o + + +-CC = gcc ++CC ?= gcc + #CFLAGS= -g -ansi-strict -W -Wall -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. +-CFLAGS= -g -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. ++OPT_CFLAGS = -g ++CFLAGS= $(OPT_CFLAGS) -DUSE_WEIGHTED_LINKS -DUSE_PROJECT_HEADER -I. + # -I$(HOME)/lib/include + # -DREPORT_MAX_ALLOC + +@@ -44,7 +45,7 @@ liblpo.a: $(LIBOBJECTS) + + # NB: LIBRARY MUST FOLLOW OBJECTS OR LINK FAILS WITH UNRESOLVED REFERENCES!! + poa: $(OBJECTS) liblpo.a +- $(CC) -o $@ $(OBJECTS) -lm liblpo.a ++ $(CC) $(LDFLAGS) -o $@ $(OBJECTS) -lm liblpo.a + + what: + @echo poa: partial-order based sequence alignment program |